Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HOXA13P31271 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXA13P31271 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HOXA13P31271 RNU6-1256P-201ENST00000516539 103 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 AP003181.2-201ENST00000528941 181 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 AP000873.5-201ENST00000533906 236 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 RPL21P5-201ENST00000554662 472 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 AC009977.1-201ENST00000586015 570 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.41□□□□□ -1.86
HOXA13P31271 AC087752.4-201ENST00000605911 462 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 AC108479.2-201ENST00000617314 601 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 AC002076.2-201ENST00000617362 122 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 AC068792.1-201ENST00000621354 417 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXA13P31271 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXA13P31271 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HOXA13P31271 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HOXA13P31271 RNY4P34-201ENST00000364779 95 ntBASIC3.4□□□□□ -1.87
HOXA13P31271 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
HOXA13P31271 SNORD115.1-201ENST00000391109 76 ntBASIC3.4□□□□□ -1.87
HOXA13P31271 U3.26-201ENST00000391236 204 ntBASIC3.4□□□□□ -1.87
HOXA13P31271 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXA13P31271 HMGN1P14-201ENST00000412459 517 ntBASIC3.4□□□□□ -1.87
HOXA13P31271 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXA13P31271 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXA13P31271 USP9YP15-201ENST00000442391 422 ntBASIC3.4□□□□□ -1.87
HOXA13P31271 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXA13P31271 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXA13P31271 AL033528.1-201ENST00000453780 140 ntBASIC3.4□□□□□ -1.87
HOXA13P31271 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXA13P31271 snoU109.1-201ENST00000459339 135 ntBASIC3.4□□□□□ -1.87
HOXA13P31271 RPS20P20-201ENST00000460498 340 ntBASIC3.4□□□□□ -1.87
HOXA13P31271 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HOXA13P31271 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXA13P31271 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.4□□□□□ -1.87
HOXA13P31271 NDUFB4P2-201ENST00000509515 391 ntBASIC3.4□□□□□ -1.87
HOXA13P31271 SCARNA13-201ENST00000516672 275 ntBASIC3.4□□□□□ -1.87
HOXA13P31271 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.4□□□□□ -1.87
HOXA13P31271 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXA13P31271 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXA13P31271 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXA13P31271 AC087683.1-201ENST00000591187 441 ntBASIC3.4□□□□□ -1.87
HOXA13P31271 AC002545.1-201ENST00000592511 181 ntBASIC3.4□□□□□ -1.87
HOXA13P31271 AC073648.5-201ENST00000603502 305 ntBASIC3.4□□□□□ -1.87
HOXA13P31271 BX664608.1-201ENST00000610519 487 ntBASIC3.4□□□□□ -1.87
HOXA13P31271 AC138749.5-201ENST00000611461 208 ntBASIC3.4□□□□□ -1.87
HOXA13P31271 AC116165.2-201ENST00000616705 206 ntBASIC3.4□□□□□ -1.87
HOXA13P31271 AC091953.2-201ENST00000623979 160 ntBASIC3.4□□□□□ -1.87
HOXA13P31271 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXA13P31271 AC110994.2-201ENST00000635481 492 ntBASIC3.4□□□□□ -1.87
HOXA13P31271 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXA13P31271 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
HOXA13P31271 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.4□□□□□ -1.87
HOXA13P31271 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HOXA13P31271 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HOXA13P31271 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXA13P31271 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXA13P31271 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA13P31271 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXA13P31271 RNU6-297P-201ENST00000384636 107 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 RNU6-192P-201ENST00000391253 100 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 RNU2-16P-201ENST00000410712 136 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 RN7SKP140-201ENST00000411196 284 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 AL663109.1-201ENST00000411498 844 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 AC245291.1-201ENST00000419501 328 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA13P31271 USP12PX-201ENST00000432383 1057 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 HMGN2P20-201ENST00000437531 273 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA13P31271 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXA13P31271 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HOXA13P31271 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA13P31271 AC097462.2-201ENST00000504623 481 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA13P31271 CDC42P4-201ENST00000510507 563 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 RNU6-1231P-201ENST00000517185 103 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HOXA13P31271 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.39□□□□□ -1.87
HOXA13P31271 AC107934.1-201ENST00000522215 217 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 OR5G4P-201ENST00000525251 760 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.39□□□□□ -1.87
HOXA13P31271 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA13P31271 AC093012.1-202ENST00000549403 582 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA13P31271 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA13P31271 MIR3118-1-201ENST00000581787 76 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 HMGN1P30-201ENST00000589286 268 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXA13P31271 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 AL390240.1-201ENST00000612950 384 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 AC068831.7-201ENST00000616954 363 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.39□□□□□ -1.87
HOXA13P31271 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HOXA13P31271 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXA13P31271 SDAD1P2-201ENST00000441308 2028 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 CUL1P1-201ENST00000509510 2425 ntBASIC3.39□□□□□ -1.87
HOXA13P31271 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms