Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL121978.1-201ENST00000402778 359 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A5P29400 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A5P29400 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A5P29400 AC234781.2-201ENST00000426370 994 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
COL4A5P29400 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A5P29400 TPTE2P1-204ENST00000435256 593 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 RPS15AP7-201ENST00000439294 405 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.64□□□□□ -2.15
COL4A5P29400 MTND5P8-201ENST00000449817 1083 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A5P29400 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
COL4A5P29400 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A5P29400 EEF1B2P4-201ENST00000551398 348 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A5P29400 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.64□□□□□ -2.15
COL4A5P29400 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.64□□□□□ -2.15
COL4A5P29400 AC091057.2-201ENST00000602594 792 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 AL136363.1-201ENST00000605349 337 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 AC016911.1-201ENST00000613297 452 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.64□□□□□ -2.15
COL4A5P29400 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.64□□□□□ -2.15
COL4A5P29400 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
COL4A5P29400 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
COL4A5P29400 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.64□□□□□ -2.15
COL4A5P29400 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
COL4A5P29400 AC130650.2-201ENST00000618736 2403 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A5P29400 AL357078.2-201ENST00000416486 427 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.64□□□□□ -2.15
COL4A5P29400 RPL27AP8-201ENST00000424277 446 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.64□□□□□ -2.15
COL4A5P29400 RPP40P1-201ENST00000426762 456 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 MTND4LP14-201ENST00000429447 288 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 MTND2P19-201ENST00000449129 1012 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 AC096751.1-202ENST00000502691 1067 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
COL4A5P29400 RNA5SP364-201ENST00000516938 78 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 HSPE1P20-201ENST00000538133 289 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 GAS5-AS1-201ENST00000602767 694 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 NUTF2P8-201ENST00000604593 363 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 AC096586.1-201ENST00000610267 561 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 AC110079.1-202ENST00000635213 138 ntBASIC1.64□□□□□ -2.15
COL4A5P29400 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL4A5P29400 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
COL4A5P29400 AC111188.2-201ENST00000529697 1387 ntBASIC1.63□□□□□ -2.15
COL4A5P29400 RNU5D-1-201ENST00000363299 116 ntBASIC1.63□□□□□ -2.15
COL4A5P29400 SNORA51.6-201ENST00000384151 125 ntBASIC1.63□□□□□ -2.15
COL4A5P29400 MIR520E-201ENST00000384867 87 ntBASIC1.63□□□□□ -2.15
COL4A5P29400 RNU6-1197P-201ENST00000391183 107 ntBASIC1.63□□□□□ -2.15
COL4A5P29400 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
COL4A5P29400 FO393413.1-201ENST00000402892 195 ntBASIC1.63□□□□□ -2.15
COL4A5P29400 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.63□□□□□ -2.15
COL4A5P29400 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.63□□□□□ -2.15
COL4A5P29400 TRIM60P13-201ENST00000432350 1283 ntBASIC1.63□□□□□ -2.15
COL4A5P29400 AL121871.1-201ENST00000443413 436 ntBASIC1.63□□□□□ -2.15
COL4A5P29400 MTCO3P2-201ENST00000457365 171 ntBASIC1.63□□□□□ -2.15
COL4A5P29400 AC104164.3-201ENST00000467363 1258 ntBASIC1.63□□□□□ -2.15
COL4A5P29400 RPS27P23-201ENST00000487608 251 ntBASIC1.63□□□□□ -2.15
COL4A5P29400 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.63□□□□□ -2.15
COL4A5P29400 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.63□□□□□ -2.15
COL4A5P29400 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.63□□□□□ -2.15
COL4A5P29400 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.63□□□□□ -2.15
COL4A5P29400 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.63□□□□□ -2.15
COL4A5P29400 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.63□□□□□ -2.15
COL4A5P29400 AC245036.5-201ENST00000596330 847 ntBASIC1.63□□□□□ -2.15
COL4A5P29400 AC097504.2-201ENST00000608088 454 ntBASIC1.63□□□□□ -2.15
COL4A5P29400 FRG1HP-204ENST00000617940 757 ntBASIC1.63□□□□□ -2.15
COL4A5P29400 ICE2P2-201ENST00000483823 2787 ntBASIC1.63□□□□□ -2.15
COL4A5P29400 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL4A5P29400 ZNF519P1-201ENST00000449011 1626 ntBASIC1.62□□□□□ -2.15
COL4A5P29400 AC138915.1-201ENST00000565427 1685 ntBASIC1.62□□□□□ -2.15
COL4A5P29400 SNORA40.6-201ENST00000391153 128 ntBASIC1.62□□□□□ -2.15
COL4A5P29400 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.62□□□□□ -2.15
COL4A5P29400 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.62□□□□□ -2.15
COL4A5P29400 MTND4LP7-201ENST00000431728 294 ntBASIC1.62□□□□□ -2.15
COL4A5P29400 AL512661.1-201ENST00000434586 1253 ntBASIC1.62□□□□□ -2.15
COL4A5P29400 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.62□□□□□ -2.15
COL4A5P29400 OR51B8P-201ENST00000449892 769 ntBASIC1.62□□□□□ -2.15
COL4A5P29400 KLRA1P-201ENST00000503499 986 ntBASIC1.62□□□□□ -2.15
COL4A5P29400 MTCO1P47-201ENST00000523889 1271 ntBASIC1.62□□□□□ -2.15
COL4A5P29400 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
COL4A5P29400 AC090666.1-201ENST00000578241 445 ntBASIC1.62□□□□□ -2.15
COL4A5P29400 MTATP6P3-201ENST00000581686 676 ntBASIC1.62□□□□□ -2.15
COL4A5P29400 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.62□□□□□ -2.15
COL4A5P29400 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.62□□□□□ -2.15
COL4A5P29400 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
COL4A5P29400 RNU1-105P-201ENST00000363470 161 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 RNU6-1080P-201ENST00000383982 107 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
COL4A5P29400 MIR548J-201ENST00000408833 112 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 AL035410.1-201ENST00000427409 427 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.61□□□□□ -2.15
COL4A5P29400 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.61□□□□□ -2.15
COL4A5P29400 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
COL4A5P29400 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.61□□□□□ -2.15
COL4A5P29400 RNU6-27P-201ENST00000516146 107 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 RNA5SP476-201ENST00000516613 103 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms