Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MIR492-201ENST00000638676 116 ntBASIC5.1□□□□□ -1.59
ERCC3P19447 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
ERCC3P19447 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ERCC3P19447 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ERCC3P19447 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
ERCC3P19447 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
ERCC3P19447 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
ERCC3P19447 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ERCC3P19447 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.09□□□□□ -1.59
ERCC3P19447 Y_RNA.212-201ENST00000364177 102 ntBASIC5.09□□□□□ -1.59
ERCC3P19447 RNU4-76P-201ENST00000364509 141 ntBASIC5.09□□□□□ -1.59
ERCC3P19447 AL356057.2-201ENST00000403318 432 ntBASIC5.09□□□□□ -1.59
ERCC3P19447 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.09□□□□□ -1.59
ERCC3P19447 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ERCC3P19447 RN7SL817P-201ENST00000480777 288 ntBASIC5.09□□□□□ -1.59
ERCC3P19447 HMGB1P30-201ENST00000492455 606 ntBASIC5.09□□□□□ -1.59
ERCC3P19447 RNU6-1069P-201ENST00000516612 133 ntBASIC5.09□□□□□ -1.59
ERCC3P19447 RNA5SP165-201ENST00000517142 115 ntBASIC5.09□□□□□ -1.59
ERCC3P19447 AC069113.1-201ENST00000517763 267 ntBASIC5.09□□□□□ -1.59
ERCC3P19447 COPS8P3-201ENST00000526024 482 ntBASIC5.09□□□□□ -1.59
ERCC3P19447 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.09□□□□□ -1.59
ERCC3P19447 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.09□□□□□ -1.59
ERCC3P19447 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.09□□□□□ -1.59
ERCC3P19447 RMST_9.1-201ENST00000619945 193 ntBASIC5.09□□□□□ -1.59
ERCC3P19447 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ERCC3P19447 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.6
ERCC3P19447 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
ERCC3P19447 AL158163.1-201ENST00000603915 1649 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
ERCC3P19447 AC015813.6-201ENST00000624409 5808 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.08□□□□□ -1.6
ERCC3P19447 AC138393.1-203ENST00000327086 343 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 Y_RNA.259-201ENST00000364619 101 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 SNORD116-11-201ENST00000383882 92 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 Y_RNA.431-201ENST00000384086 102 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 MIR3065-201ENST00000390137 79 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 SNORA48.7-201ENST00000391302 135 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 SNORA11F-201ENST00000408237 128 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.08□□□□□ -1.6
ERCC3P19447 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.08□□□□□ -1.6
ERCC3P19447 RPL23AP69-201ENST00000431134 458 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 RPL23AP52-201ENST00000439311 478 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 RPS24P13-201ENST00000442520 397 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.08□□□□□ -1.6
ERCC3P19447 RPS4XP13-201ENST00000483219 789 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 AC104164.2-201ENST00000496953 495 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 SLC25A15P5-201ENST00000508033 253 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.08□□□□□ -1.6
ERCC3P19447 AC008716.1-201ENST00000511084 513 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 Y_RNA.701-201ENST00000516812 110 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 AC087854.1-201ENST00000519706 414 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 TRAV28-201ENST00000557548 323 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC5.08□□□□□ -1.6
ERCC3P19447 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.08□□□□□ -1.6
ERCC3P19447 BPIFA4P-203ENST00000603168 689 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 AC025946.2-201ENST00000603398 234 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 AC079587.1-201ENST00000603846 277 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC5.08□□□□□ -1.6
ERCC3P19447 AL133255.1-201ENST00000606374 441 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 AL355365.1-201ENST00000616480 294 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 AL160413.1-201ENST00000622780 310 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 AC048347.1-201ENST00000624621 427 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 AC140479.6-201ENST00000633535 357 ntBASIC5.08□□□□□ -1.6
ERCC3P19447 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
ERCC3P19447 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ERCC3P19447 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ERCC3P19447 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ERCC3P19447 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.07□□□□□ -1.6
ERCC3P19447 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ERCC3P19447 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ERCC3P19447 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ERCC3P19447 RNU6-562P-201ENST00000362731 107 ntBASIC5.07□□□□□ -1.6
ERCC3P19447 RNU6-214P-201ENST00000384130 107 ntBASIC5.07□□□□□ -1.6
ERCC3P19447 RNU6-1297P-201ENST00000384415 104 ntBASIC5.07□□□□□ -1.6
ERCC3P19447 HDGFP1-201ENST00000405943 252 ntBASIC5.07□□□□□ -1.6
ERCC3P19447 YPEL5P1-201ENST00000419731 367 ntBASIC5.07□□□□□ -1.6
ERCC3P19447 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.07□□□□□ -1.6
ERCC3P19447 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.07□□□□□ -1.6
ERCC3P19447 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ERCC3P19447 AC091153.1-201ENST00000466297 402 ntBASIC5.07□□□□□ -1.6
ERCC3P19447 AC008526.1-201ENST00000509149 338 ntBASIC5.07□□□□□ -1.6
ERCC3P19447 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ERCC3P19447 AP005639.2-201ENST00000527592 928 ntBASIC5.07□□□□□ -1.6
ERCC3P19447 CBX3P7-201ENST00000532876 502 ntBASIC5.07□□□□□ -1.6
ERCC3P19447 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.07□□□□□ -1.6
ERCC3P19447 AL121821.2-201ENST00000556081 394 ntBASIC5.07□□□□□ -1.6
ERCC3P19447 MTCO3P23-201ENST00000561363 289 ntBASIC5.07□□□□□ -1.6
ERCC3P19447 POLR3GP2-201ENST00000588366 668 ntBASIC5.07□□□□□ -1.6
ERCC3P19447 AL670379.10-201ENST00000604330 253 ntBASIC5.07□□□□□ -1.6
ERCC3P19447 AL670379.9-201ENST00000605428 253 ntBASIC5.07□□□□□ -1.6
ERCC3P19447 ATP5A1P2-202ENST00000616464 443 ntBASIC5.07□□□□□ -1.6
ERCC3P19447 AC126177.8-201ENST00000618339 1015 ntBASIC5.07□□□□□ -1.6
ERCC3P19447 AL359757.2-201ENST00000624309 274 ntBASIC5.07□□□□□ -1.6
ERCC3P19447 MTND4LP32-201ENST00000636111 270 ntBASIC5.07□□□□□ -1.6
ERCC3P19447 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ERCC3P19447 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.07□□□□□ -1.6
ERCC3P19447 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ERCC3P19447 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ERCC3P19447 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms