Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 MIR3176-201ENST00000582210 90 ntBASIC4.29□□□□□ -1.72
ATF4P18848 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.29□□□□□ -1.72
ATF4P18848 HSPE1P7-201ENST00000604681 321 ntBASIC4.29□□□□□ -1.72
ATF4P18848 AC016925.2-201ENST00000605108 242 ntBASIC4.29□□□□□ -1.72
ATF4P18848 MIR3976-201ENST00000606807 139 ntBASIC4.29□□□□□ -1.72
ATF4P18848 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.29□□□□□ -1.72
ATF4P18848 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.29□□□□□ -1.72
ATF4P18848 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
ATF4P18848 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
ATF4P18848 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATF4P18848 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATF4P18848 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATF4P18848 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATF4P18848 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ATF4P18848 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATF4P18848 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.28□□□□□ -1.72
ATF4P18848 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ATF4P18848 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.28□□□□□ -1.72
ATF4P18848 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ATF4P18848 RNU6-78P-201ENST00000362897 107 ntBASIC4.28□□□□□ -1.72
ATF4P18848 RNU6-270P-201ENST00000364131 105 ntBASIC4.28□□□□□ -1.72
ATF4P18848 RN7SKP280-201ENST00000364196 304 ntBASIC4.28□□□□□ -1.72
ATF4P18848 Z98749.2-208ENST00000381646 500 ntBASIC4.28□□□□□ -1.72
ATF4P18848 AP000567.1-201ENST00000406413 156 ntBASIC4.28□□□□□ -1.72
ATF4P18848 SNORA11B-201ENST00000408175 129 ntBASIC4.28□□□□□ -1.72
ATF4P18848 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.28□□□□□ -1.72
ATF4P18848 AL355433.1-201ENST00000422804 300 ntBASIC4.28□□□□□ -1.72
ATF4P18848 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.28□□□□□ -1.72
ATF4P18848 AL358472.1-201ENST00000431295 329 ntBASIC4.28□□□□□ -1.72
ATF4P18848 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.28□□□□□ -1.72
ATF4P18848 AC098831.1-201ENST00000440661 216 ntBASIC4.28□□□□□ -1.72
ATF4P18848 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.28□□□□□ -1.72
ATF4P18848 snoU13.28-201ENST00000459235 104 ntBASIC4.28□□□□□ -1.72
ATF4P18848 AC022215.1-201ENST00000481770 362 ntBASIC4.28□□□□□ -1.72
ATF4P18848 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.28□□□□□ -1.72
ATF4P18848 RNA5SP384-201ENST00000516615 116 ntBASIC4.28□□□□□ -1.72
ATF4P18848 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.28□□□□□ -1.72
ATF4P18848 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.28□□□□□ -1.72
ATF4P18848 MTCO3P13-201ENST00000577757 781 ntBASIC4.28□□□□□ -1.72
ATF4P18848 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.28□□□□□ -1.72
ATF4P18848 AC006116.3-201ENST00000592968 361 ntBASIC4.28□□□□□ -1.72
ATF4P18848 MTND4LP5-201ENST00000605152 292 ntBASIC4.28□□□□□ -1.72
ATF4P18848 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.28□□□□□ -1.72
ATF4P18848 AL138880.2-201ENST00000616214 239 ntBASIC4.28□□□□□ -1.72
ATF4P18848 AC068831.7-201ENST00000616954 363 ntBASIC4.28□□□□□ -1.72
ATF4P18848 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.28□□□□□ -1.72
ATF4P18848 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATF4P18848 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATF4P18848 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.28□□□□□ -1.72
ATF4P18848 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
ATF4P18848 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATF4P18848 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.28□□□□□ -1.72
ATF4P18848 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
ATF4P18848 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATF4P18848 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.28□□□□□ -1.73
ATF4P18848 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.28□□□□□ -1.73
ATF4P18848 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
ATF4P18848 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATF4P18848 AC109780.1-201ENST00000451768 1344 ntBASIC4.27□□□□□ -1.73
ATF4P18848 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATF4P18848 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATF4P18848 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATF4P18848 AL159987.1-201ENST00000347911 293 ntBASIC4.27□□□□□ -1.73
ATF4P18848 Y_RNA.28-201ENST00000362554 111 ntBASIC4.27□□□□□ -1.73
ATF4P18848 RNU6-527P-201ENST00000363425 104 ntBASIC4.27□□□□□ -1.73
ATF4P18848 MIR606-201ENST00000384851 96 ntBASIC4.27□□□□□ -1.73
ATF4P18848 AL009179.1-201ENST00000406085 265 ntBASIC4.27□□□□□ -1.73
ATF4P18848 RNU6-174P-201ENST00000410406 106 ntBASIC4.27□□□□□ -1.73
ATF4P18848 RNU6-55P-201ENST00000411092 107 ntBASIC4.27□□□□□ -1.73
ATF4P18848 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.27□□□□□ -1.73
ATF4P18848 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.27□□□□□ -1.73
ATF4P18848 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.27□□□□□ -1.73
ATF4P18848 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.27□□□□□ -1.73
ATF4P18848 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.27□□□□□ -1.73
ATF4P18848 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.27□□□□□ -1.73
ATF4P18848 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.27□□□□□ -1.73
ATF4P18848 CFL1P1-202ENST00000432948 411 ntBASIC4.27□□□□□ -1.73
ATF4P18848 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.27□□□□□ -1.73
ATF4P18848 AC064862.4-201ENST00000442180 334 ntBASIC4.27□□□□□ -1.73
ATF4P18848 AL035666.1-201ENST00000446195 348 ntBASIC4.27□□□□□ -1.73
ATF4P18848 AC125238.1-201ENST00000448842 249 ntBASIC4.27□□□□□ -1.73
ATF4P18848 HMGN2P7-201ENST00000456186 273 ntBASIC4.27□□□□□ -1.73
ATF4P18848 SNRPGP3-201ENST00000469405 227 ntBASIC4.27□□□□□ -1.73
ATF4P18848 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.27□□□□□ -1.73
ATF4P18848 RPSAP50-201ENST00000481955 852 ntBASIC4.27□□□□□ -1.73
ATF4P18848 RPL23AP49-201ENST00000492925 468 ntBASIC4.27□□□□□ -1.73
ATF4P18848 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.27□□□□□ -1.73
ATF4P18848 RPS27AP10-201ENST00000496103 208 ntBASIC4.27□□□□□ -1.73
ATF4P18848 AC022493.2-201ENST00000506122 481 ntBASIC4.27□□□□□ -1.73
ATF4P18848 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.27□□□□□ -1.73
ATF4P18848 OR51K1P-201ENST00000510214 950 ntBASIC4.27□□□□□ -1.73
ATF4P18848 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.27□□□□□ -1.73
ATF4P18848 RNA5SP154-201ENST00000516193 111 ntBASIC4.27□□□□□ -1.73
ATF4P18848 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.27□□□□□ -1.73
ATF4P18848 AP005902.1-201ENST00000521358 186 ntBASIC4.27□□□□□ -1.73
ATF4P18848 OR5D15P-201ENST00000531671 942 ntBASIC4.27□□□□□ -1.73
ATF4P18848 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.27□□□□□ -1.73
ATF4P18848 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.27□□□□□ -1.73
ATF4P18848 AC005476.1-201ENST00000554427 397 ntBASIC4.27□□□□□ -1.73
ATF4P18848 AC022404.1-201ENST00000555320 273 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms