Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.9□□□□□ -1.95
VCLP18206 AC009094.1-201ENST00000564443 426 ntBASIC2.9□□□□□ -1.95
VCLP18206 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VCLP18206 AC008277.2-201ENST00000605196 797 ntBASIC2.9□□□□□ -1.95
VCLP18206 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.9□□□□□ -1.95
VCLP18206 AC006927.3-201ENST00000638789 384 ntBASIC2.9□□□□□ -1.95
VCLP18206 AC096644.4-201ENST00000563417 2912 ntBASIC2.9□□□□□ -1.95
VCLP18206 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.89□□□□□ -1.95
VCLP18206 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VCLP18206 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.89□□□□□ -1.95
VCLP18206 Y_RNA.46-201ENST00000362695 102 ntBASIC2.89□□□□□ -1.95
VCLP18206 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
VCLP18206 SNORD21-201ENST00000383953 95 ntBASIC2.89□□□□□ -1.95
VCLP18206 MIR23A-201ENST00000385245 73 ntBASIC2.89□□□□□ -1.95
VCLP18206 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
VCLP18206 NDUFB4P4-201ENST00000404822 243 ntBASIC2.89□□□□□ -1.95
VCLP18206 EEF1A1P41-201ENST00000414667 207 ntBASIC2.89□□□□□ -1.95
VCLP18206 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.89□□□□□ -1.95
VCLP18206 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.89□□□□□ -1.95
VCLP18206 TIMM9P1-201ENST00000436122 256 ntBASIC2.89□□□□□ -1.95
VCLP18206 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.89□□□□□ -1.95
VCLP18206 AC087588.1-201ENST00000462203 316 ntBASIC2.89□□□□□ -1.95
VCLP18206 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.89□□□□□ -1.95
VCLP18206 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.89□□□□□ -1.95
VCLP18206 RNU6-826P-201ENST00000516827 104 ntBASIC2.89□□□□□ -1.95
VCLP18206 RN7SKP258-201ENST00000517151 304 ntBASIC2.89□□□□□ -1.95
VCLP18206 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.89□□□□□ -1.95
VCLP18206 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
VCLP18206 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.89□□□□□ -1.95
VCLP18206 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.89□□□□□ -1.95
VCLP18206 HSPE1P20-201ENST00000538133 289 ntBASIC2.89□□□□□ -1.95
VCLP18206 AL356432.3-201ENST00000568952 465 ntBASIC2.89□□□□□ -1.95
VCLP18206 AP000403.1-201ENST00000603349 851 ntBASIC2.89□□□□□ -1.95
VCLP18206 AL035413.2-201ENST00000604801 525 ntBASIC2.89□□□□□ -1.95
VCLP18206 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.89□□□□□ -1.95
VCLP18206 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.89□□□□□ -1.95
VCLP18206 AC010338.1-201ENST00000621823 717 ntBASIC2.89□□□□□ -1.95
VCLP18206 Y_RNA.97-201ENST00000363094 102 ntBASIC2.88□□□□□ -1.95
VCLP18206 RNU6-501P-201ENST00000364072 100 ntBASIC2.88□□□□□ -1.95
VCLP18206 SNORA44-201ENST00000384584 132 ntBASIC2.88□□□□□ -1.95
VCLP18206 MIR888-201ENST00000401186 77 ntBASIC2.88□□□□□ -1.95
VCLP18206 RNU2-62P-201ENST00000410868 191 ntBASIC2.88□□□□□ -1.95
VCLP18206 RNU6-193P-201ENST00000410977 107 ntBASIC2.88□□□□□ -1.95
VCLP18206 RNA5SP492-201ENST00000411330 114 ntBASIC2.88□□□□□ -1.95
VCLP18206 ELOCP17-201ENST00000414751 326 ntBASIC2.88□□□□□ -1.95
VCLP18206 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.88□□□□□ -1.95
VCLP18206 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.88□□□□□ -1.95
VCLP18206 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.88□□□□□ -1.95
VCLP18206 MTATP6P30-201ENST00000443540 664 ntBASIC2.88□□□□□ -1.95
VCLP18206 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.88□□□□□ -1.95
VCLP18206 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VCLP18206 RPS27AP9-201ENST00000477681 438 ntBASIC2.88□□□□□ -1.95
VCLP18206 AIG1P1-201ENST00000503376 148 ntBASIC2.88□□□□□ -1.95
VCLP18206 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.88□□□□□ -1.95
VCLP18206 RNU6-201P-201ENST00000517100 61 ntBASIC2.88□□□□□ -1.95
VCLP18206 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.88□□□□□ -1.95
VCLP18206 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VCLP18206 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
VCLP18206 MTND4LP18-201ENST00000526864 291 ntBASIC2.88□□□□□ -1.95
VCLP18206 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.88□□□□□ -1.95
VCLP18206 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.88□□□□□ -1.95
VCLP18206 ZNF321P-202ENST00000550843 495 ntBASIC2.88□□□□□ -1.95
VCLP18206 AL391261.3-201ENST00000557194 520 ntBASIC2.88□□□□□ -1.95
VCLP18206 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
VCLP18206 AC012435.1-202ENST00000568772 240 ntBASIC2.88□□□□□ -1.95
VCLP18206 MIR4293-201ENST00000584305 78 ntBASIC2.88□□□□□ -1.95
VCLP18206 AC005498.1-201ENST00000592125 465 ntBASIC2.88□□□□□ -1.95
VCLP18206 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.88□□□□□ -1.95
VCLP18206 AC020895.1-201ENST00000595362 272 ntBASIC2.88□□□□□ -1.95
VCLP18206 MTCYBP22-201ENST00000603788 447 ntBASIC2.88□□□□□ -1.95
VCLP18206 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
VCLP18206 AL020991.1-201ENST00000612314 373 ntBASIC2.88□□□□□ -1.95
VCLP18206 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.88□□□□□ -1.95
VCLP18206 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.88□□□□□ -1.95
VCLP18206 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.88□□□□□ -1.95
VCLP18206 AC131159.1-201ENST00000621854 213 ntBASIC2.88□□□□□ -1.95
VCLP18206 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
VCLP18206 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.88□□□□□ -1.95
VCLP18206 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VCLP18206 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VCLP18206 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VCLP18206 RNU6-500P-201ENST00000362349 107 ntBASIC2.87□□□□□ -1.95
VCLP18206 RPS20P2-201ENST00000402520 389 ntBASIC2.87□□□□□ -1.95
VCLP18206 HMGN2P35-201ENST00000412164 270 ntBASIC2.87□□□□□ -1.95
VCLP18206 AC006366.1-201ENST00000422002 759 ntBASIC2.87□□□□□ -1.95
VCLP18206 COTL1P1-201ENST00000422309 375 ntBASIC2.87□□□□□ -1.95
VCLP18206 AC011233.1-201ENST00000422812 283 ntBASIC2.87□□□□□ -1.95
VCLP18206 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.87□□□□□ -1.95
VCLP18206 HMGB1P27-201ENST00000431429 603 ntBASIC2.87□□□□□ -1.95
VCLP18206 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.87□□□□□ -1.95
VCLP18206 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.87□□□□□ -1.95
VCLP18206 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.87□□□□□ -1.95
VCLP18206 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.87□□□□□ -1.95
VCLP18206 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.87□□□□□ -1.95
VCLP18206 RPL12P25-201ENST00000455592 494 ntBASIC2.87□□□□□ -1.95
VCLP18206 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.87□□□□□ -1.95
VCLP18206 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.87□□□□□ -1.95
VCLP18206 AC114786.4-201ENST00000508771 728 ntBASIC2.87□□□□□ -1.95
VCLP18206 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.87□□□□□ -1.95
VCLP18206 AC114797.1-201ENST00000514003 728 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms