Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MTND2P39-201ENST00000457230 764 ntBASIC1.93□□□□□ -2.1
CD28P10747 AC107626.1-201ENST00000471084 183 ntBASIC1.93□□□□□ -2.1
CD28P10747 RPL7P18-201ENST00000478965 734 ntBASIC1.93□□□□□ -2.1
CD28P10747 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.93□□□□□ -2.1
CD28P10747 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.93□□□□□ -2.1
CD28P10747 AC135721.1-201ENST00000497954 479 ntBASIC1.93□□□□□ -2.1
CD28P10747 YWHAEP4-201ENST00000505390 198 ntBASIC1.93□□□□□ -2.1
CD28P10747 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.93□□□□□ -2.1
CD28P10747 SNORA31.15-201ENST00000516771 132 ntBASIC1.93□□□□□ -2.1
CD28P10747 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.93□□□□□ -2.1
CD28P10747 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.93□□□□□ -2.1
CD28P10747 AC136618.2-201ENST00000575091 400 ntBASIC1.93□□□□□ -2.1
CD28P10747 AL161734.1-201ENST00000609720 557 ntBASIC1.93□□□□□ -2.1
CD28P10747 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CD28P10747 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.93□□□□□ -2.1
CD28P10747 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.93□□□□□ -2.1
CD28P10747 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.93□□□□□ -2.1
CD28P10747 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.93□□□□□ -2.1
CD28P10747 AC010608.3-201ENST00000625048 527 ntBASIC1.93□□□□□ -2.1
CD28P10747 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CD28P10747 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.93□□□□□ -2.1
CD28P10747 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.93□□□□□ -2.1
CD28P10747 AC006378.2-201ENST00000623178 2476 ntBASIC1.93□□□□□ -2.1
CD28P10747 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.92□□□□□ -2.1
CD28P10747 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.92□□□□□ -2.1
CD28P10747 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.92□□□□□ -2.1
CD28P10747 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.92□□□□□ -2.1
CD28P10747 RNU2-25P-201ENST00000411041 191 ntBASIC1.92□□□□□ -2.1
CD28P10747 AC106883.1-201ENST00000418805 562 ntBASIC1.92□□□□□ -2.1
CD28P10747 USP9YP26-201ENST00000421008 661 ntBASIC1.92□□□□□ -2.1
CD28P10747 AC098614.2-201ENST00000426040 255 ntBASIC1.92□□□□□ -2.1
CD28P10747 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.92□□□□□ -2.1
CD28P10747 AL121890.1-201ENST00000435457 205 ntBASIC1.92□□□□□ -2.1
CD28P10747 AC004854.1-201ENST00000440356 349 ntBASIC1.92□□□□□ -2.1
CD28P10747 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.92□□□□□ -2.1
CD28P10747 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.92□□□□□ -2.1
CD28P10747 FGF7P5-201ENST00000441829 291 ntBASIC1.92□□□□□ -2.1
CD28P10747 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CD28P10747 MTCO3P45-201ENST00000443036 613 ntBASIC1.92□□□□□ -2.1
CD28P10747 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.92□□□□□ -2.1
CD28P10747 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CD28P10747 TPT1P14-201ENST00000448018 505 ntBASIC1.92□□□□□ -2.1
CD28P10747 AC092155.2-201ENST00000454675 477 ntBASIC1.92□□□□□ -2.1
CD28P10747 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.92□□□□□ -2.1
CD28P10747 RPL31P41-201ENST00000477967 372 ntBASIC1.92□□□□□ -2.1
CD28P10747 AC126182.1-201ENST00000478134 357 ntBASIC1.92□□□□□ -2.1
CD28P10747 AC034222.1-201ENST00000494052 532 ntBASIC1.92□□□□□ -2.1
CD28P10747 AC138853.1-201ENST00000503549 823 ntBASIC1.92□□□□□ -2.1
CD28P10747 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.92□□□□□ -2.1
CD28P10747 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.92□□□□□ -2.1
CD28P10747 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.92□□□□□ -2.1
CD28P10747 RPPH1-2P-201ENST00000516688 293 ntBASIC1.92□□□□□ -2.1
CD28P10747 HMGN1P28-201ENST00000521340 364 ntBASIC1.92□□□□□ -2.1
CD28P10747 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.92□□□□□ -2.1
CD28P10747 ATP5F1P5-201ENST00000526403 760 ntBASIC1.92□□□□□ -2.1
CD28P10747 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.92□□□□□ -2.1
CD28P10747 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CD28P10747 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CD28P10747 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.92□□□□□ -2.1
CD28P10747 TMF1P1-201ENST00000576058 373 ntBASIC1.92□□□□□ -2.1
CD28P10747 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.92□□□□□ -2.1
CD28P10747 AC060766.3-201ENST00000591442 263 ntBASIC1.92□□□□□ -2.1
CD28P10747 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.92□□□□□ -2.1
CD28P10747 AL356575.1-201ENST00000603008 283 ntBASIC1.92□□□□□ -2.1
CD28P10747 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.92□□□□□ -2.1
CD28P10747 FTX_3.1-201ENST00000610451 147 ntBASIC1.92□□□□□ -2.1
CD28P10747 AL133445.2-201ENST00000611191 527 ntBASIC1.92□□□□□ -2.1
CD28P10747 AC010133.1-201ENST00000615809 842 ntBASIC1.92□□□□□ -2.1
CD28P10747 AC140725.3-201ENST00000616193 880 ntBASIC1.92□□□□□ -2.1
CD28P10747 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.92□□□□□ -2.1
CD28P10747 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.92□□□□□ -2.1
CD28P10747 PCMTD1P7-201ENST00000634506 357 ntBASIC1.92□□□□□ -2.1
CD28P10747 MTND5P33-201ENST00000571250 1450 ntBASIC1.92□□□□□ -2.1
CD28P10747 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CD28P10747 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CD28P10747 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC1.92□□□□□ -2.1
CD28P10747 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CD28P10747 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CD28P10747 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.91□□□□□ -2.1
CD28P10747 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.91□□□□□ -2.1
CD28P10747 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
CD28P10747 RNU6-636P-201ENST00000384598 107 ntBASIC1.91□□□□□ -2.1
CD28P10747 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CD28P10747 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CD28P10747 AL359511.1-201ENST00000402970 211 ntBASIC1.91□□□□□ -2.1
CD28P10747 RNU6-193P-201ENST00000410977 107 ntBASIC1.91□□□□□ -2.1
CD28P10747 PIGPP2-201ENST00000411569 458 ntBASIC1.91□□□□□ -2.1
CD28P10747 MTCO2P8-201ENST00000412213 658 ntBASIC1.91□□□□□ -2.1
CD28P10747 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC1.91□□□□□ -2.1
CD28P10747 AC083875.1-201ENST00000419509 405 ntBASIC1.91□□□□□ -2.1
CD28P10747 ZNF863P-201ENST00000426746 417 ntBASIC1.91□□□□□ -2.1
CD28P10747 GTF2IP20-201ENST00000431663 360 ntBASIC1.91□□□□□ -2.1
CD28P10747 AC010095.1-201ENST00000443543 144 ntBASIC1.91□□□□□ -2.1
CD28P10747 PAXBP1P1-201ENST00000449315 447 ntBASIC1.91□□□□□ -2.1
CD28P10747 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.91□□□□□ -2.1
CD28P10747 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.91□□□□□ -2.1
CD28P10747 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.91□□□□□ -2.1
CD28P10747 AC234781.5-201ENST00000508429 271 ntBASIC1.91□□□□□ -2.1
CD28P10747 AC114786.4-201ENST00000508771 728 ntBASIC1.91□□□□□ -2.1
CD28P10747 OR5BM1P-201ENST00000512021 366 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms