Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 SNORD21-201ENST00000383953 95 ntBASIC2.96□□□□□ -1.94
VIMP08670 FCF1P10-201ENST00000407590 479 ntBASIC2.96□□□□□ -1.94
VIMP08670 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.96□□□□□ -1.94
VIMP08670 RPS15AP12-201ENST00000419498 388 ntBASIC2.96□□□□□ -1.94
VIMP08670 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.96□□□□□ -1.94
VIMP08670 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.96□□□□□ -1.94
VIMP08670 AC019097.1-201ENST00000424783 735 ntBASIC2.96□□□□□ -1.94
VIMP08670 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.96□□□□□ -1.94
VIMP08670 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.96□□□□□ -1.94
VIMP08670 CYCSP32-201ENST00000440548 321 ntBASIC2.96□□□□□ -1.94
VIMP08670 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.96□□□□□ -1.94
VIMP08670 USP9YP12-201ENST00000450481 570 ntBASIC2.96□□□□□ -1.94
VIMP08670 AP000705.1-201ENST00000454567 350 ntBASIC2.96□□□□□ -1.94
VIMP08670 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.96□□□□□ -1.94
VIMP08670 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.96□□□□□ -1.94
VIMP08670 RNU1-45P-201ENST00000517191 141 ntBASIC2.96□□□□□ -1.94
VIMP08670 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.96□□□□□ -1.94
VIMP08670 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.96□□□□□ -1.94
VIMP08670 AP006587.4-201ENST00000526053 529 ntBASIC2.96□□□□□ -1.94
VIMP08670 AP003181.2-201ENST00000528941 181 ntBASIC2.96□□□□□ -1.94
VIMP08670 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VIMP08670 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.96□□□□□ -1.94
VIMP08670 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.96□□□□□ -1.94
VIMP08670 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.96□□□□□ -1.94
VIMP08670 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.96□□□□□ -1.94
VIMP08670 MIR548AB-201ENST00000584917 84 ntBASIC2.96□□□□□ -1.94
VIMP08670 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.96□□□□□ -1.94
VIMP08670 AC098826.3-201ENST00000603823 466 ntBASIC2.96□□□□□ -1.94
VIMP08670 AL359999.1-201ENST00000604513 294 ntBASIC2.96□□□□□ -1.94
VIMP08670 MTND4LP5-201ENST00000605152 292 ntBASIC2.96□□□□□ -1.94
VIMP08670 AC138749.5-201ENST00000611461 208 ntBASIC2.96□□□□□ -1.94
VIMP08670 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VIMP08670 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.96□□□□□ -1.94
VIMP08670 AC004852.3-201ENST00000614131 326 ntBASIC2.96□□□□□ -1.94
VIMP08670 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.96□□□□□ -1.94
VIMP08670 AC116165.2-201ENST00000616705 206 ntBASIC2.96□□□□□ -1.94
VIMP08670 AC068831.8-201ENST00000620171 435 ntBASIC2.96□□□□□ -1.94
VIMP08670 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
VIMP08670 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
VIMP08670 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
VIMP08670 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VIMP08670 PTMAP2-201ENST00000397627 327 ntBASIC2.95□□□□□ -1.94
VIMP08670 RNU2-36P-201ENST00000410361 191 ntBASIC2.95□□□□□ -1.94
VIMP08670 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.95□□□□□ -1.94
VIMP08670 MTND2P18-201ENST00000419962 1030 ntBASIC2.95□□□□□ -1.94
VIMP08670 RAC1P6-201ENST00000423911 575 ntBASIC2.95□□□□□ -1.94
VIMP08670 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.95□□□□□ -1.94
VIMP08670 ELOCP14-201ENST00000428070 331 ntBASIC2.95□□□□□ -1.94
VIMP08670 MTND1P28-201ENST00000435623 950 ntBASIC2.95□□□□□ -1.94
VIMP08670 AC006028.1-201ENST00000438379 402 ntBASIC2.95□□□□□ -1.94
VIMP08670 ELOCP7-201ENST00000439968 331 ntBASIC2.95□□□□□ -1.94
VIMP08670 COX6CP12-201ENST00000446748 202 ntBASIC2.95□□□□□ -1.94
VIMP08670 CECR9-201ENST00000453421 199 ntBASIC2.95□□□□□ -1.94
VIMP08670 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.95□□□□□ -1.94
VIMP08670 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.95□□□□□ -1.94
VIMP08670 SNORA31.3-201ENST00000516029 96 ntBASIC2.95□□□□□ -1.94
VIMP08670 AC128657.1-201ENST00000549459 145 ntBASIC2.95□□□□□ -1.94
VIMP08670 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
VIMP08670 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.95□□□□□ -1.94
VIMP08670 HMGN2P15-201ENST00000585707 270 ntBASIC2.95□□□□□ -1.94
VIMP08670 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.95□□□□□ -1.94
VIMP08670 AC012065.4-201ENST00000602445 679 ntBASIC2.95□□□□□ -1.94
VIMP08670 AC112191.3-201ENST00000604371 277 ntBASIC2.95□□□□□ -1.94
VIMP08670 AL161798.1-201ENST00000604630 131 ntBASIC2.95□□□□□ -1.94
VIMP08670 AC004805.2-201ENST00000605382 482 ntBASIC2.95□□□□□ -1.94
VIMP08670 AC007619.2-201ENST00000605743 379 ntBASIC2.95□□□□□ -1.94
VIMP08670 AC012360.2-201ENST00000609349 391 ntBASIC2.95□□□□□ -1.94
VIMP08670 AC103710.2-201ENST00000609912 942 ntBASIC2.95□□□□□ -1.94
VIMP08670 AL121772.2-201ENST00000614331 297 ntBASIC2.95□□□□□ -1.94
VIMP08670 AC009878.1-201ENST00000621819 340 ntBASIC2.95□□□□□ -1.94
VIMP08670 AC091931.1-201ENST00000623488 728 ntBASIC2.95□□□□□ -1.94
VIMP08670 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.95□□□□□ -1.94
VIMP08670 AL049781.1-201ENST00000623195 3585 ntBASIC2.94□□□□□ -1.94
VIMP08670 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.94□□□□□ -1.94
VIMP08670 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
VIMP08670 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VIMP08670 UBE2L2-201ENST00000254302 429 ntBASIC2.94□□□□□ -1.94
VIMP08670 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
VIMP08670 AC073325.2-201ENST00000339545 159 ntBASIC2.94□□□□□ -1.94
VIMP08670 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.94□□□□□ -1.94
VIMP08670 RNU6-511P-201ENST00000363496 107 ntBASIC2.94□□□□□ -1.94
VIMP08670 RNU6-884P-201ENST00000363889 107 ntBASIC2.94□□□□□ -1.94
VIMP08670 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VIMP08670 HMGN2P35-201ENST00000412164 270 ntBASIC2.94□□□□□ -1.94
VIMP08670 AL513477.1-202ENST00000417061 214 ntBASIC2.94□□□□□ -1.94
VIMP08670 ZNF90P2-204ENST00000419323 1075 ntBASIC2.94□□□□□ -1.94
VIMP08670 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.94□□□□□ -1.94
VIMP08670 AC006366.1-201ENST00000422002 759 ntBASIC2.94□□□□□ -1.94
VIMP08670 AL353678.1-201ENST00000422735 741 ntBASIC2.94□□□□□ -1.94
VIMP08670 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.94□□□□□ -1.94
VIMP08670 SNRPEP9-201ENST00000436794 238 ntBASIC2.94□□□□□ -1.94
VIMP08670 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.94□□□□□ -1.94
VIMP08670 MTND1P12-201ENST00000455231 147 ntBASIC2.94□□□□□ -1.94
VIMP08670 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.94□□□□□ -1.94
VIMP08670 AC008155.2-201ENST00000464337 397 ntBASIC2.94□□□□□ -1.94
VIMP08670 RPS29P20-201ENST00000489592 171 ntBASIC2.94□□□□□ -1.94
VIMP08670 RPS27P26-201ENST00000494583 239 ntBASIC2.94□□□□□ -1.94
VIMP08670 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.94□□□□□ -1.94
VIMP08670 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
VIMP08670 AC022878.1-201ENST00000530684 149 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 181.2 ms