Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.9□□□□□ -2.26
SPTA1P02549 AL035407.2-201ENST00000454090 378 ntBASIC0.9□□□□□ -2.26
SPTA1P02549 HMGB1P38-201ENST00000490557 577 ntBASIC0.9□□□□□ -2.26
SPTA1P02549 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.9□□□□□ -2.26
SPTA1P02549 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.9□□□□□ -2.26
SPTA1P02549 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.9□□□□□ -2.26
SPTA1P02549 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.9□□□□□ -2.26
SPTA1P02549 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
SPTA1P02549 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.9□□□□□ -2.26
SPTA1P02549 AP003117.1-201ENST00000602771 554 ntBASIC0.9□□□□□ -2.26
SPTA1P02549 AC096586.2-201ENST00000610260 441 ntBASIC0.9□□□□□ -2.26
SPTA1P02549 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
SPTA1P02549 AC020658.4-201ENST00000613987 684 ntBASIC0.9□□□□□ -2.26
SPTA1P02549 AC091925.1-201ENST00000623204 462 ntBASIC0.9□□□□□ -2.26
SPTA1P02549 AC103710.2-202ENST00000641454 2853 ntBASIC0.9□□□□□ -2.27
SPTA1P02549 SNORA7.2-201ENST00000364446 145 ntBASIC0.9□□□□□ -2.27
SPTA1P02549 RPL7P27-201ENST00000403775 720 ntBASIC0.9□□□□□ -2.27
SPTA1P02549 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC0.9□□□□□ -2.27
SPTA1P02549 COX6CP18-201ENST00000448769 222 ntBASIC0.9□□□□□ -2.27
SPTA1P02549 MTCO3P35-201ENST00000485582 781 ntBASIC0.9□□□□□ -2.27
SPTA1P02549 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC0.9□□□□□ -2.27
SPTA1P02549 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.9□□□□□ -2.27
SPTA1P02549 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.9□□□□□ -2.27
SPTA1P02549 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
SPTA1P02549 OR6C7P-201ENST00000547875 934 ntBASIC0.9□□□□□ -2.27
SPTA1P02549 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
SPTA1P02549 AC145207.9-201ENST00000623802 325 ntBASIC0.9□□□□□ -2.27
SPTA1P02549 Z86062.1-201ENST00000406773 777 ntBASIC0.89□□□□□ -2.27
SPTA1P02549 MTND2P9-201ENST00000422293 931 ntBASIC0.89□□□□□ -2.27
SPTA1P02549 UBE2FP3-201ENST00000436366 524 ntBASIC0.89□□□□□ -2.27
SPTA1P02549 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.89□□□□□ -2.27
SPTA1P02549 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.89□□□□□ -2.27
SPTA1P02549 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.89□□□□□ -2.27
SPTA1P02549 AC067942.3-201ENST00000512025 362 ntBASIC0.89□□□□□ -2.27
SPTA1P02549 RNA5SP285-201ENST00000516619 119 ntBASIC0.89□□□□□ -2.27
SPTA1P02549 OSBPL9P3-201ENST00000534523 595 ntBASIC0.89□□□□□ -2.27
SPTA1P02549 MIR4711-201ENST00000578274 70 ntBASIC0.89□□□□□ -2.27
SPTA1P02549 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.89□□□□□ -2.27
SPTA1P02549 FAM106CP-201ENST00000582212 507 ntBASIC0.89□□□□□ -2.27
SPTA1P02549 AL713998.2-201ENST00000604538 1198 ntBASIC0.89□□□□□ -2.27
SPTA1P02549 AC009229.3-201ENST00000608056 282 ntBASIC0.89□□□□□ -2.27
SPTA1P02549 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
SPTA1P02549 RNU6-1180P-201ENST00000364935 107 ntBASIC0.89□□□□□ -2.27
SPTA1P02549 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SPTA1P02549 RPL21P90-201ENST00000415692 466 ntBASIC0.89□□□□□ -2.27
SPTA1P02549 AC244636.1-201ENST00000421152 228 ntBASIC0.89□□□□□ -2.27
SPTA1P02549 RPL31P63-201ENST00000422565 375 ntBASIC0.89□□□□□ -2.27
SPTA1P02549 RPL7P34-201ENST00000433316 712 ntBASIC0.89□□□□□ -2.27
SPTA1P02549 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.89□□□□□ -2.27
SPTA1P02549 AC234775.1-201ENST00000454247 670 ntBASIC0.89□□□□□ -2.27
SPTA1P02549 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.89□□□□□ -2.27
SPTA1P02549 AL158032.1-201ENST00000605401 106 ntBASIC0.89□□□□□ -2.27
SPTA1P02549 AC008083.4-201ENST00000615076 444 ntBASIC0.89□□□□□ -2.27
SPTA1P02549 AP006248.3-201ENST00000623580 594 ntBASIC0.89□□□□□ -2.27
SPTA1P02549 RNU6-222P-201ENST00000362438 107 ntBASIC0.88□□□□□ -2.27
SPTA1P02549 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.88□□□□□ -2.27
SPTA1P02549 MIR17-201ENST00000385012 84 ntBASIC0.88□□□□□ -2.27
SPTA1P02549 PGBD4P6-201ENST00000421501 610 ntBASIC0.88□□□□□ -2.27
SPTA1P02549 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.88□□□□□ -2.27
SPTA1P02549 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC0.88□□□□□ -2.27
SPTA1P02549 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.88□□□□□ -2.27
SPTA1P02549 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.88□□□□□ -2.27
SPTA1P02549 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SPTA1P02549 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.88□□□□□ -2.27
SPTA1P02549 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC0.88□□□□□ -2.27
SPTA1P02549 RNU6-955P-201ENST00000410497 104 ntBASIC0.88□□□□□ -2.27
SPTA1P02549 AL591704.2-201ENST00000421658 181 ntBASIC0.88□□□□□ -2.27
SPTA1P02549 AC012497.1-201ENST00000429392 575 ntBASIC0.88□□□□□ -2.27
SPTA1P02549 LSM1P1-201ENST00000438629 273 ntBASIC0.88□□□□□ -2.27
SPTA1P02549 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC0.88□□□□□ -2.27
SPTA1P02549 snoU13.19-201ENST00000459148 104 ntBASIC0.88□□□□□ -2.27
SPTA1P02549 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC0.88□□□□□ -2.27
SPTA1P02549 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.88□□□□□ -2.27
SPTA1P02549 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.88□□□□□ -2.27
SPTA1P02549 MTND3P24-201ENST00000506306 329 ntBASIC0.88□□□□□ -2.27
SPTA1P02549 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC0.88□□□□□ -2.27
SPTA1P02549 AC112198.4-201ENST00000515450 351 ntBASIC0.88□□□□□ -2.27
SPTA1P02549 SNORA31.23-201ENST00000517219 133 ntBASIC0.88□□□□□ -2.27
SPTA1P02549 MTND4LP24-201ENST00000572277 291 ntBASIC0.88□□□□□ -2.27
SPTA1P02549 BX322635.1-201ENST00000605804 496 ntBASIC0.88□□□□□ -2.27
SPTA1P02549 AC103810.9-201ENST00000606688 112 ntBASIC0.88□□□□□ -2.27
SPTA1P02549 AP003072.4-201ENST00000624580 310 ntBASIC0.88□□□□□ -2.27
SPTA1P02549 AC099654.7-201ENST00000635788 2127 ntBASIC0.88□□□□□ -2.27
SPTA1P02549 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
SPTA1P02549 RPS29P28-201ENST00000446439 141 ntBASIC0.87□□□□□ -2.27
SPTA1P02549 RPL30P14-201ENST00000482744 348 ntBASIC0.87□□□□□ -2.27
SPTA1P02549 AC105252.1-201ENST00000503089 286 ntBASIC0.87□□□□□ -2.27
SPTA1P02549 BOLA3P3-201ENST00000505182 232 ntBASIC0.87□□□□□ -2.27
SPTA1P02549 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.87□□□□□ -2.27
SPTA1P02549 AC104806.1-201ENST00000508720 308 ntBASIC0.87□□□□□ -2.27
SPTA1P02549 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.87□□□□□ -2.27
SPTA1P02549 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.87□□□□□ -2.27
SPTA1P02549 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.87□□□□□ -2.27
SPTA1P02549 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
SPTA1P02549 SNRPEP3-201ENST00000338402 276 ntBASIC0.87□□□□□ -2.27
SPTA1P02549 SNORD14B-201ENST00000364533 90 ntBASIC0.87□□□□□ -2.27
SPTA1P02549 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SPTA1P02549 MIR513A1-201ENST00000385138 129 ntBASIC0.87□□□□□ -2.27
SPTA1P02549 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
SPTA1P02549 OR51A5P-201ENST00000415429 942 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms