Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC025881.1-201ENST00000518851 512 ntBASIC2.44□□□□□ -2.02
CLDN9O95484 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.44□□□□□ -2.02
CLDN9O95484 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.44□□□□□ -2.02
CLDN9O95484 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.44□□□□□ -2.02
CLDN9O95484 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.44□□□□□ -2.02
CLDN9O95484 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.44□□□□□ -2.02
CLDN9O95484 TMF1P1-201ENST00000576058 373 ntBASIC2.44□□□□□ -2.02
CLDN9O95484 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.44□□□□□ -2.02
CLDN9O95484 AL136981.2-201ENST00000617319 734 ntBASIC2.44□□□□□ -2.02
CLDN9O95484 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.44□□□□□ -2.02
CLDN9O95484 AC092608.2-201ENST00000624427 218 ntBASIC2.44□□□□□ -2.02
CLDN9O95484 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.44□□□□□ -2.02
CLDN9O95484 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
CLDN9O95484 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
CLDN9O95484 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLDN9O95484 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLDN9O95484 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CLDN9O95484 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLDN9O95484 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.43□□□□□ -2.02
CLDN9O95484 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CLDN9O95484 RNA5SP456-201ENST00000364002 114 ntBASIC2.43□□□□□ -2.02
CLDN9O95484 RNU6-906P-201ENST00000384700 70 ntBASIC2.43□□□□□ -2.02
CLDN9O95484 AL139039.1-201ENST00000401900 692 ntBASIC2.43□□□□□ -2.02
CLDN9O95484 RNU2-49P-201ENST00000410666 184 ntBASIC2.43□□□□□ -2.02
CLDN9O95484 TXNL1P1-201ENST00000429528 554 ntBASIC2.43□□□□□ -2.02
CLDN9O95484 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.43□□□□□ -2.02
CLDN9O95484 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.43□□□□□ -2.02
CLDN9O95484 RPS15AP5-201ENST00000436276 388 ntBASIC2.43□□□□□ -2.02
CLDN9O95484 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.43□□□□□ -2.02
CLDN9O95484 AC009961.3-201ENST00000449832 765 ntBASIC2.43□□□□□ -2.02
CLDN9O95484 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.43□□□□□ -2.02
CLDN9O95484 AC004924.1-201ENST00000480160 781 ntBASIC2.43□□□□□ -2.02
CLDN9O95484 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.43□□□□□ -2.02
CLDN9O95484 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.43□□□□□ -2.02
CLDN9O95484 AC093809.1-201ENST00000509155 340 ntBASIC2.43□□□□□ -2.02
CLDN9O95484 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.43□□□□□ -2.02
CLDN9O95484 RNA5SP290-201ENST00000517133 127 ntBASIC2.43□□□□□ -2.02
CLDN9O95484 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.43□□□□□ -2.02
CLDN9O95484 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CLDN9O95484 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.43□□□□□ -2.02
CLDN9O95484 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.43□□□□□ -2.02
CLDN9O95484 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.43□□□□□ -2.02
CLDN9O95484 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.43□□□□□ -2.02
CLDN9O95484 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.43□□□□□ -2.02
CLDN9O95484 AC106052.1-201ENST00000608029 497 ntBASIC2.43□□□□□ -2.02
CLDN9O95484 AC097478.2-201ENST00000610572 514 ntBASIC2.43□□□□□ -2.02
CLDN9O95484 AC103798.2-201ENST00000624292 632 ntBASIC2.43□□□□□ -2.02
CLDN9O95484 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLDN9O95484 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLDN9O95484 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CLDN9O95484 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLDN9O95484 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
CLDN9O95484 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.42□□□□□ -2.02
CLDN9O95484 OR56A5-201ENST00000340110 738 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 MIR6073-201ENST00000352083 89 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 RNU6-925P-201ENST00000384629 104 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 MIR27B-201ENST00000385129 97 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 MIR888-201ENST00000401186 77 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 AL162578.1-201ENST00000406202 378 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 AL359704.1-201ENST00000411586 781 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.42□□□□□ -2.02
CLDN9O95484 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CLDN9O95484 RPL21P24-201ENST00000413752 448 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 MTCO2P17-201ENST00000424336 677 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 AC019097.1-201ENST00000424783 735 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 MTCO2P23-201ENST00000425216 680 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 AC063976.3-201ENST00000426849 329 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 ARL5AP4-201ENST00000430731 512 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN9O95484 AL121890.1-201ENST00000435457 205 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.42□□□□□ -2.02
CLDN9O95484 AL009048.1-201ENST00000450437 298 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.42□□□□□ -2.02
CLDN9O95484 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.42□□□□□ -2.02
CLDN9O95484 AL160314.1-201ENST00000490836 438 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN9O95484 AC110760.3-202ENST00000515177 371 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN9O95484 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLDN9O95484 AL133153.1-201ENST00000557756 303 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN9O95484 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN9O95484 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.42□□□□□ -2.02
CLDN9O95484 AL139022.2-201ENST00000606934 443 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.42□□□□□ -2.02
CLDN9O95484 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.42□□□□□ -2.02
CLDN9O95484 AC022306.3-201ENST00000619930 550 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 AP000484.1-201ENST00000620067 1252 ntBASIC2.42□□□□□ -2.02
CLDN9O95484 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.41□□□□□ -2.02
CLDN9O95484 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.41□□□□□ -2.02
CLDN9O95484 SNORA25.6-201ENST00000364121 118 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 RNU6-461P-201ENST00000364195 107 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
CLDN9O95484 MIR34A-201ENST00000385130 110 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 RN7SKP266-201ENST00000410232 287 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 RNU2-25P-201ENST00000411041 191 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.41□□□□□ -2.02
CLDN9O95484 ELOCP9-201ENST00000418624 239 ntBASIC2.41□□□□□ -2.02
CLDN9O95484 AC010153.1-201ENST00000432862 727 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms