Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MTND1P28-201ENST00000435623 950 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 UBE2D3P1-201ENST00000436669 444 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC28A1O00337 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC28A1O00337 MRPS17P3-201ENST00000465453 385 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 RPL7P49-201ENST00000471402 708 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
SLC28A1O00337 RPL30P6-201ENST00000475925 342 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 RPS3AP22-201ENST00000488297 769 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 AC083906.5-201ENST00000503722 328 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 RPF2P2-201ENST00000504693 896 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 AC005178.1-201ENST00000508392 440 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 AF131216.2-201ENST00000512316 564 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 MTCO1P47-201ENST00000523889 1271 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 SUB1P1-201ENST00000524415 382 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC28A1O00337 ZNF519P3-201ENST00000557158 1032 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 MIR3944-201ENST00000581277 108 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 MIR3605-201ENST00000583214 100 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC28A1O00337 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.74□□□□□ -1.97
SLC28A1O00337 AC098826.3-201ENST00000603823 466 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 AL035413.2-201ENST00000604801 525 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 MTND4LP5-201ENST00000605152 292 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 AC008498.1-201ENST00000613012 531 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC28A1O00337 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC28A1O00337 UCA1.1-201ENST00000620952 75 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC28A1O00337 AC090617.7-201ENST00000623952 126 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.74□□□□□ -1.97
SLC28A1O00337 MTND5P29-201ENST00000458676 1807 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 AC092593.1-201ENST00000515413 1815 ntBASIC2.74□□□□□ -1.97
SLC28A1O00337 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SLC28A1O00337 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.74□□□□□ -1.97
SLC28A1O00337 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
SLC28A1O00337 ZNF519P1-201ENST00000449011 1626 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC28A1O00337 MIR26A1-201ENST00000362205 77 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.73□□□□□ -1.97
SLC28A1O00337 RPL7P10-201ENST00000417407 739 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 ZNF90P2-204ENST00000419323 1075 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 ELOCP14-201ENST00000428070 331 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 AC104332.2-201ENST00000429959 156 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 GTF2IP20-201ENST00000431663 360 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 RPS20P5-201ENST00000434808 360 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 AL513043.1-201ENST00000439124 535 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 ELOCP7-201ENST00000439968 331 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 WASF1P1-201ENST00000447560 1131 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 AL358232.1-201ENST00000448030 501 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 RPL37P4-201ENST00000448908 268 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.73□□□□□ -1.97
SLC28A1O00337 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC28A1O00337 RNU7-125P-201ENST00000458760 62 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 RPL36AP51-201ENST00000487216 318 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC28A1O00337 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.73□□□□□ -1.97
SLC28A1O00337 AC009901.1-201ENST00000506703 541 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC28A1O00337 MTND1P22-201ENST00000510572 951 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 MRPS33P3-201ENST00000513456 322 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.73□□□□□ -1.97
SLC28A1O00337 RNA5SP471-201ENST00000516971 106 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 RNU6-232P-201ENST00000517144 64 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC28A1O00337 AC025881.1-201ENST00000518851 512 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 AC087373.1-201ENST00000524920 491 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.73□□□□□ -1.97
SLC28A1O00337 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.73□□□□□ -1.97
SLC28A1O00337 MTCO3P13-201ENST00000577757 781 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.73□□□□□ -1.97
SLC28A1O00337 AC005498.1-201ENST00000592125 465 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 AC023043.3-201ENST00000593113 385 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 AC010620.2-201ENST00000600135 313 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 SRGNP1-201ENST00000603392 451 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 AL161798.1-201ENST00000604630 131 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 AC004805.2-201ENST00000605382 482 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 YPEL5P2-201ENST00000605553 359 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 AL360219.1-201ENST00000610230 366 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SLC28A1O00337 AC079248.2-201ENST00000623779 326 ntBASIC2.73□□□□□ -1.97
SLC28A1O00337 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC28A1O00337 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.73□□□□□ -1.97
SLC28A1O00337 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.73□□□□□ -1.97
SLC28A1O00337 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SLC28A1O00337 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SLC28A1O00337 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SLC28A1O00337 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SLC28A1O00337 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SLC28A1O00337 RNU5A-2P-201ENST00000384337 116 ntBASIC2.72□□□□□ -1.97
SLC28A1O00337 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SLC28A1O00337 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.72□□□□□ -1.97
SLC28A1O00337 AL512633.1-201ENST00000399931 655 ntBASIC2.72□□□□□ -1.97
SLC28A1O00337 MTCYBP36-201ENST00000404146 440 ntBASIC2.72□□□□□ -1.97
SLC28A1O00337 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.72□□□□□ -1.97
SLC28A1O00337 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.72□□□□□ -1.97
SLC28A1O00337 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.72□□□□□ -1.97
SLC28A1O00337 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms