Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.7□□□□□ -1.98
PDLIM1O00151 LARP1BP3-201ENST00000437229 869 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 RPL22P17-201ENST00000438729 315 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 MTCO3P45-201ENST00000443036 613 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 MRPL50P4-201ENST00000446432 475 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.7□□□□□ -1.98
PDLIM1O00151 AC008481.1-201ENST00000463278 396 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 S100A11P2-201ENST00000467589 312 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 BZW1P2-201ENST00000473537 826 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 RPL23AP41-201ENST00000484754 458 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 AC098862.1-201ENST00000504991 413 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 CDC42P4-201ENST00000510507 563 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 AF131216.2-201ENST00000512316 564 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 MRPS33P3-201ENST00000513456 322 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 RNU6-232P-201ENST00000517144 64 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 AC026241.1-201ENST00000517873 2142 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.7□□□□□ -1.98
PDLIM1O00151 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.7□□□□□ -1.98
PDLIM1O00151 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.7□□□□□ -1.98
PDLIM1O00151 AC123904.3-201ENST00000547218 814 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.7□□□□□ -1.98
PDLIM1O00151 AL161734.1-201ENST00000609720 557 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 AC103710.1-201ENST00000610003 901 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 AL137847.3-201ENST00000611521 109 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.7□□□□□ -1.98
PDLIM1O00151 AC004223.4-201ENST00000612426 332 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 OR5H6-203ENST00000642105 978 ntBASIC2.7□□□□□ -1.98
PDLIM1O00151 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.7□□□□□ -1.98
PDLIM1O00151 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
PDLIM1O00151 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.7□□□□□ -1.98
PDLIM1O00151 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
PDLIM1O00151 MIR422A-201ENST00000362286 90 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 RNU6-809P-201ENST00000384461 107 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 MIR512-1-201ENST00000384913 84 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 MIR483-201ENST00000385070 76 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 RNA5SP354-201ENST00000391247 136 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PDLIM1O00151 MTCYBP36-201ENST00000404146 440 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PDLIM1O00151 HMGN2P30-201ENST00000423237 256 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.69□□□□□ -1.98
PDLIM1O00151 AC007919.1-201ENST00000429380 217 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 UBE2D3P1-201ENST00000436669 444 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 AL512286.1-201ENST00000439244 400 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 CYCSP32-201ENST00000440548 321 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 RPL37P4-201ENST00000448908 268 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 AL133217.1-201ENST00000450980 425 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 ZNF114P1-201ENST00000453500 292 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.69□□□□□ -1.98
PDLIM1O00151 AL139824.2-201ENST00000458731 1095 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.69□□□□□ -1.98
PDLIM1O00151 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.69□□□□□ -1.98
PDLIM1O00151 OR5BM1P-201ENST00000512021 366 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 RNU1-104P-201ENST00000517280 175 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 IGLV3-17-201ENST00000519099 244 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.69□□□□□ -1.98
PDLIM1O00151 HMGB1P14-201ENST00000557424 591 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.69□□□□□ -1.98
PDLIM1O00151 AC002545.1-201ENST00000592511 181 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 AP001981.2-201ENST00000603241 418 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 AC005046.1-201ENST00000608515 625 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 AL355472.4-201ENST00000610233 626 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 AC090970.3-201ENST00000612566 866 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.69□□□□□ -1.98
PDLIM1O00151 AC122133.1-201ENST00000613964 233 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 AC091953.5-201ENST00000622919 233 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 AC093591.3-201ENST00000634516 308 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 AC097655.1-201ENST00000635075 318 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 AL445523.1-201ENST00000451184 1362 ntBASIC2.69□□□□□ -1.98
PDLIM1O00151 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PDLIM1O00151 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.68□□□□□ -1.98
PDLIM1O00151 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PDLIM1O00151 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PDLIM1O00151 MIR22-201ENST00000362190 85 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 Y_RNA.46-201ENST00000362695 102 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 Y_RNA.97-201ENST00000363094 102 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 SNORA48.5-201ENST00000391143 135 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 AC078974.1-201ENST00000411597 223 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 AL513477.1-202ENST00000417061 214 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.68□□□□□ -1.98
PDLIM1O00151 AL365184.2-201ENST00000431139 435 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 USP12PX-201ENST00000432383 1057 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.68□□□□□ -1.98
PDLIM1O00151 AL512844.2-201ENST00000433990 593 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 ARPC3P1-201ENST00000437218 533 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.68□□□□□ -1.98
PDLIM1O00151 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.68□□□□□ -1.98
PDLIM1O00151 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.68□□□□□ -1.98
PDLIM1O00151 GDI2P2-201ENST00000445131 608 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 CBWD4P-201ENST00000445695 655 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.68□□□□□ -1.98
PDLIM1O00151 MTND4LP3-201ENST00000468320 276 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PDLIM1O00151 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.68□□□□□ -1.98
PDLIM1O00151 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.68□□□□□ -1.98
PDLIM1O00151 AC008716.1-201ENST00000511084 513 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.68□□□□□ -1.98
PDLIM1O00151 RNA5SP341-201ENST00000516261 117 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms