Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC211469.2-201ENST00000605461 205 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 RNU6-222P-201ENST00000362438 107 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 RNA5SP368-201ENST00000364298 116 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 Y_RNA.413-201ENST00000384007 102 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 Z86062.1-201ENST00000406773 777 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 MOB4-205ENST00000409916 829 ntTSL 3 BASIC0.85□□□□□ -2.27
COL6A5A8TX70 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.85□□□□□ -2.27
COL6A5A8TX70 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.85□□□□□ -2.27
COL6A5A8TX70 AL031663.1-201ENST00000437445 219 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 ELOCP10-201ENST00000440624 327 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC0.85□□□□□ -2.27
COL6A5A8TX70 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.85□□□□□ -2.27
COL6A5A8TX70 Y_RNA.754-201ENST00000476024 102 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 RNU6-711P-201ENST00000517255 106 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 CBX3P7-201ENST00000532876 502 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 ELOCP34-201ENST00000604436 327 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 Y_RNA.790-201ENST00000614282 102 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 Y_RNA.782-201ENST00000614695 102 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 uc_338.22-201ENST00000622722 187 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 MIR936-201ENST00000401264 98 ntBASIC0.84□□□□□ -2.27
COL6A5A8TX70 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
COL6A5A8TX70 RNU6-1064P-201ENST00000410626 104 ntBASIC0.84□□□□□ -2.27
COL6A5A8TX70 PRELID3BP11-201ENST00000414230 479 ntBASIC0.84□□□□□ -2.27
COL6A5A8TX70 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.84□□□□□ -2.27
COL6A5A8TX70 HMGB3P10-201ENST00000434734 572 ntBASIC0.84□□□□□ -2.27
COL6A5A8TX70 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.84□□□□□ -2.27
COL6A5A8TX70 HSPE1P22-201ENST00000456856 327 ntBASIC0.84□□□□□ -2.27
COL6A5A8TX70 snoU109.1-201ENST00000459339 135 ntBASIC0.84□□□□□ -2.27
COL6A5A8TX70 Y_RNA.804-201ENST00000615262 101 ntBASIC0.84□□□□□ -2.27
COL6A5A8TX70 AC140725.3-201ENST00000616193 880 ntBASIC0.84□□□□□ -2.27
COL6A5A8TX70 Pinc.1-201ENST00000616452 154 ntBASIC0.84□□□□□ -2.27
COL6A5A8TX70 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
COL6A5A8TX70 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
COL6A5A8TX70 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
COL6A5A8TX70 RNU6-1180P-201ENST00000364935 107 ntBASIC0.84□□□□□ -2.28
COL6A5A8TX70 RPL21P24-201ENST00000413752 448 ntBASIC0.84□□□□□ -2.28
COL6A5A8TX70 MTCO1P3-201ENST00000429327 192 ntBASIC0.84□□□□□ -2.28
COL6A5A8TX70 RPL7P34-201ENST00000433316 712 ntBASIC0.84□□□□□ -2.28
COL6A5A8TX70 UBE2FP3-201ENST00000436366 524 ntBASIC0.84□□□□□ -2.28
COL6A5A8TX70 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC0.84□□□□□ -2.28
COL6A5A8TX70 AC098583.1-201ENST00000480875 255 ntBASIC0.84□□□□□ -2.28
COL6A5A8TX70 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.84□□□□□ -2.28
COL6A5A8TX70 CYCSP2-201ENST00000558168 301 ntBASIC0.84□□□□□ -2.28
COL6A5A8TX70 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
COL6A5A8TX70 RNA5SP118-201ENST00000410385 109 ntBASIC0.83□□□□□ -2.28
COL6A5A8TX70 AC096533.1-201ENST00000411645 353 ntBASIC0.83□□□□□ -2.28
COL6A5A8TX70 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC0.83□□□□□ -2.28
COL6A5A8TX70 CDC42P4-201ENST00000510507 563 ntBASIC0.83□□□□□ -2.28
COL6A5A8TX70 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC0.83□□□□□ -2.28
COL6A5A8TX70 IGHVIII-38-1-201ENST00000521454 282 ntBASIC0.83□□□□□ -2.28
COL6A5A8TX70 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.83□□□□□ -2.28
COL6A5A8TX70 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC0.83□□□□□ -2.28
COL6A5A8TX70 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.83□□□□□ -2.28
COL6A5A8TX70 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
COL6A5A8TX70 RNU6-112P-201ENST00000363599 104 ntBASIC0.83□□□□□ -2.28
COL6A5A8TX70 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.83□□□□□ -2.28
COL6A5A8TX70 AC008379.1-201ENST00000463655 464 ntBASIC0.83□□□□□ -2.28
COL6A5A8TX70 LIAS-206ENST00000513731 826 ntTSL 5 BASIC0.83□□□□□ -2.28
COL6A5A8TX70 MTCO1P40-201ENST00000574371 625 ntBASIC0.83□□□□□ -2.28
COL6A5A8TX70 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.83□□□□□ -2.28
COL6A5A8TX70 AL589935.2-201ENST00000616471 1231 ntBASIC0.83□□□□□ -2.28
COL6A5A8TX70 HAUS6P2-201ENST00000433254 2404 ntBASIC0.82□□□□□ -2.28
COL6A5A8TX70 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.82□□□□□ -2.28
COL6A5A8TX70 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
COL6A5A8TX70 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.82□□□□□ -2.28
COL6A5A8TX70 snoU13.11-201ENST00000459219 104 ntBASIC0.82□□□□□ -2.28
COL6A5A8TX70 AC104685.1-201ENST00000502445 371 ntBASIC0.82□□□□□ -2.28
COL6A5A8TX70 AC104806.1-201ENST00000508720 308 ntBASIC0.82□□□□□ -2.28
COL6A5A8TX70 RNU6-347P-201ENST00000516658 105 ntBASIC0.82□□□□□ -2.28
COL6A5A8TX70 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.82□□□□□ -2.28
COL6A5A8TX70 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
COL6A5A8TX70 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.82□□□□□ -2.28
COL6A5A8TX70 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.82□□□□□ -2.28
COL6A5A8TX70 AP003117.1-201ENST00000602771 554 ntBASIC0.82□□□□□ -2.28
COL6A5A8TX70 AC073544.1-201ENST00000600110 1595 ntBASIC0.82□□□□□ -2.28
COL6A5A8TX70 RNU6-16P-201ENST00000384385 107 ntBASIC0.82□□□□□ -2.28
COL6A5A8TX70 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.82□□□□□ -2.28
COL6A5A8TX70 GPM6BP3-201ENST00000442797 145 ntBASIC0.82□□□□□ -2.28
COL6A5A8TX70 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.82□□□□□ -2.28
COL6A5A8TX70 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC0.82□□□□□ -2.28
COL6A5A8TX70 TRBVB-201ENST00000477100 408 ntBASIC0.82□□□□□ -2.28
COL6A5A8TX70 SNORA31.16-201ENST00000516773 139 ntBASIC0.82□□□□□ -2.28
COL6A5A8TX70 SUB1P1-201ENST00000524415 382 ntBASIC0.82□□□□□ -2.28
COL6A5A8TX70 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.82□□□□□ -2.28
COL6A5A8TX70 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC0.82□□□□□ -2.28
COL6A5A8TX70 DPRXP5-201ENST00000604662 539 ntBASIC0.82□□□□□ -2.28
COL6A5A8TX70 AL161734.1-201ENST00000609720 557 ntBASIC0.82□□□□□ -2.28
COL6A5A8TX70 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
COL6A5A8TX70 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.81□□□□□ -2.28
COL6A5A8TX70 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.81□□□□□ -2.28
COL6A5A8TX70 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.81□□□□□ -2.28
COL6A5A8TX70 DPPA3P1-201ENST00000448050 469 ntBASIC0.81□□□□□ -2.28
COL6A5A8TX70 RPL21P104-201ENST00000464143 478 ntBASIC0.81□□□□□ -2.28
COL6A5A8TX70 AC018437.1-201ENST00000492214 406 ntBASIC0.81□□□□□ -2.28
COL6A5A8TX70 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.81□□□□□ -2.28
COL6A5A8TX70 SNORD84-203ENST00000584275 78 ntBASIC0.81□□□□□ -2.28
COL6A5A8TX70 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.81□□□□□ -2.28
COL6A5A8TX70 RNA5SP205-201ENST00000364653 136 ntBASIC0.81□□□□□ -2.28
COL6A5A8TX70 RNU1-52P-201ENST00000384190 164 ntBASIC0.81□□□□□ -2.28
COL6A5A8TX70 MIR518A2-201ENST00000384966 87 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms