Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 RPS26P21-201ENST00000475397 348 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 RNU6-416P-201ENST00000516265 103 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 RNU6-334P-201ENST00000517072 102 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 OR5AK1P-201ENST00000524837 922 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 MIR4666A-201ENST00000580160 79 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 ZNF849P-201ENST00000594711 1566 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 VN1R88P-201ENST00000596787 292 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 MIR98-201ENST00000606724 119 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AP005137.2-201ENST00000609238 400 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AP005229.2-201ENST00000609980 697 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 MTND4P1-201ENST00000457501 1466 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AC138915.1-201ENST00000565427 1685 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 SNORA7.2-201ENST00000364446 145 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 RNU6-1197P-201ENST00000391183 107 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 RPL23AP47-201ENST00000408017 460 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 RNA5SP489-201ENST00000410986 109 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 RPS12P24-201ENST00000412619 387 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 TAF13P2-201ENST00000416876 286 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 RPS15AP40-201ENST00000419621 391 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 MTCO2P20-201ENST00000437339 673 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AC091860.1-201ENST00000505723 432 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 HIGD1AP6-201ENST00000521833 279 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AP003066.2-201ENST00000529375 555 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AC023824.3-201ENST00000569003 562 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AC245036.5-201ENST00000596330 847 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AC012493.3-201ENST00000604494 112 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AL009028.1-201ENST00000604895 802 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AC024257.5-201ENST00000612739 531 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AC243773.3-201ENST00000613270 256 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AL590396.4-201ENST00000636779 956 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 RNU6-354P-201ENST00000383862 107 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 RNU1-109P-201ENST00000383960 147 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 RNU6-207P-201ENST00000384137 107 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 RNU6-610P-201ENST00000384264 107 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 MTCO1P56-201ENST00000401674 224 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AL365400.1-201ENST00000431854 640 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 ARF4P4-201ENST00000439608 520 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AC005297.2-201ENST00000450430 606 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 SNRPFP3-201ENST00000457792 225 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 LRRC6P1-201ENST00000532188 885 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 ZNF971P-201ENST00000562068 1249 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AC024614.2-201ENST00000577584 372 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AF129408.1-201ENST00000608767 431 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AC025588.4-201ENST00000615802 908 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AC098679.5-201ENST00000624394 571 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AC135776.4-201ENST00000624300 1904 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AC111188.2-201ENST00000529697 1387 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 Y_RNA.472-201ENST00000384322 102 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 ANAPC10P1-201ENST00000395991 556 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 RPL7P27-201ENST00000403775 720 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 HMGN1P14-201ENST00000412459 517 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 SRIP3-201ENST00000413200 219 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AC007435.1-201ENST00000421086 415 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 RAC1P8-201ENST00000427086 527 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AC241584.1-201ENST00000438469 1241 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AC093155.1-201ENST00000440164 826 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AL096829.2-201ENST00000446582 742 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 MTND2P19-201ENST00000449129 1012 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AC244505.3-201ENST00000454598 187 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 MTCO3P35-201ENST00000485582 781 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AC093801.2-201ENST00000503966 1050 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 MTCYBP16-201ENST00000509187 1129 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AC016065.2-201ENST00000514530 444 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 HSPA8P13-201ENST00000523715 472 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 EEF1B2P4-201ENST00000551398 348 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms