Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 uc_338.20-201ENST00000621563 178 ntBASIC1.08□□□□□ -2.24
CNOT1A5YKK6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CNOT1A5YKK6 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CNOT1A5YKK6 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 SNORA67.1-201ENST00000364749 141 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 LINC01347-201ENST00000417964 355 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.07□□□□□ -2.24
CNOT1A5YKK6 RPL30P4-201ENST00000429309 333 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 AL136380.1-201ENST00000447970 162 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 AL035407.2-201ENST00000454090 378 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 GTF2IP12-201ENST00000456547 356 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 TRBV8-1-201ENST00000481590 279 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 NCOR1P1-202ENST00000486162 291 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 AC092902.1-201ENST00000486999 259 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 AC104685.1-201ENST00000502445 371 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 AC025768.1-201ENST00000510057 267 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.07□□□□□ -2.24
CNOT1A5YKK6 MIR5194-201ENST00000582634 120 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.07□□□□□ -2.24
CNOT1A5YKK6 MIR6857-201ENST00000613267 93 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 ICE2P2-201ENST00000483823 2787 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.07□□□□□ -2.24
CNOT1A5YKK6 AC008669.1-201ENST00000565823 2178 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.07□□□□□ -2.24
CNOT1A5YKK6 RNA5SP252-201ENST00000391131 119 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 RPS4XP3-201ENST00000398541 413 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 AL138880.1-201ENST00000405824 642 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 MIR1197-201ENST00000408818 88 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC1.07□□□□□ -2.24
CNOT1A5YKK6 XKRYP1-201ENST00000423438 492 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 XKRYP2-201ENST00000432915 492 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 JTBP1-201ENST00000441314 247 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CNOT1A5YKK6 BOLA3P3-201ENST00000505182 232 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 SUB1P1-201ENST00000524415 382 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 AC135178.6-201ENST00000605314 398 ntBASIC1.07□□□□□ -2.24
CNOT1A5YKK6 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.07□□□□□ -2.24
CNOT1A5YKK6 Y_RNA.136-201ENST00000363444 102 ntBASIC1.06□□□□□ -2.24
CNOT1A5YKK6 AC004941.2-201ENST00000427009 228 ntBASIC1.06□□□□□ -2.24
CNOT1A5YKK6 AC022493.1-201ENST00000492984 337 ntBASIC1.06□□□□□ -2.24
CNOT1A5YKK6 AC093852.1-201ENST00000503587 266 ntBASIC1.06□□□□□ -2.24
CNOT1A5YKK6 AC093801.2-201ENST00000503966 1050 ntBASIC1.06□□□□□ -2.24
CNOT1A5YKK6 OR5BM1P-201ENST00000512021 366 ntBASIC1.06□□□□□ -2.24
CNOT1A5YKK6 AL136363.1-201ENST00000605349 337 ntBASIC1.06□□□□□ -2.24
CNOT1A5YKK6 AC025594.3-201ENST00000613068 790 ntBASIC1.06□□□□□ -2.24
CNOT1A5YKK6 SUMO2P12-201ENST00000405924 140 ntBASIC1.06□□□□□ -2.24
CNOT1A5YKK6 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.06□□□□□ -2.24
CNOT1A5YKK6 AC234064.1-201ENST00000436312 247 ntBASIC1.06□□□□□ -2.24
CNOT1A5YKK6 IPO7P1-201ENST00000442031 636 ntBASIC1.06□□□□□ -2.24
CNOT1A5YKK6 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
CNOT1A5YKK6 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
CNOT1A5YKK6 AC090517.3-201ENST00000625170 141 ntBASIC1.06□□□□□ -2.24
CNOT1A5YKK6 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CNOT1A5YKK6 DEFB108F-201ENST00000344638 222 ntBASIC1.05□□□□□ -2.24
CNOT1A5YKK6 RNU1-148P-201ENST00000384472 162 ntBASIC1.05□□□□□ -2.24
CNOT1A5YKK6 RNU6-193P-201ENST00000410977 107 ntBASIC1.05□□□□□ -2.24
CNOT1A5YKK6 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.05□□□□□ -2.24
CNOT1A5YKK6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.05□□□□□ -2.24
CNOT1A5YKK6 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.05□□□□□ -2.24
CNOT1A5YKK6 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.05□□□□□ -2.24
CNOT1A5YKK6 MTCYBP41-201ENST00000528913 1123 ntBASIC1.05□□□□□ -2.24
CNOT1A5YKK6 CYCSP26-201ENST00000534107 320 ntBASIC1.05□□□□□ -2.24
CNOT1A5YKK6 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.05□□□□□ -2.24
CNOT1A5YKK6 MTCO1P40-201ENST00000574371 625 ntBASIC1.05□□□□□ -2.24
CNOT1A5YKK6 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CNOT1A5YKK6 MIR330-201ENST00000362196 94 ntBASIC1.05□□□□□ -2.24
CNOT1A5YKK6 RNU6-203P-201ENST00000384038 104 ntBASIC1.05□□□□□ -2.24
CNOT1A5YKK6 MIR1285-1-201ENST00000408593 84 ntBASIC1.05□□□□□ -2.24
CNOT1A5YKK6 UBE2FP3-201ENST00000436366 524 ntBASIC1.05□□□□□ -2.24
CNOT1A5YKK6 AC023790.1-201ENST00000482174 347 ntBASIC1.05□□□□□ -2.24
CNOT1A5YKK6 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.05□□□□□ -2.24
CNOT1A5YKK6 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.05□□□□□ -2.24
CNOT1A5YKK6 APOOP3-201ENST00000536787 586 ntBASIC1.05□□□□□ -2.24
CNOT1A5YKK6 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.05□□□□□ -2.24
CNOT1A5YKK6 AC146944.4-201ENST00000602697 718 ntBASIC1.05□□□□□ -2.24
CNOT1A5YKK6 AC005332.10-201ENST00000612725 619 ntBASIC1.05□□□□□ -2.24
CNOT1A5YKK6 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.04□□□□□ -2.24
CNOT1A5YKK6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CNOT1A5YKK6 AC009902.3-201ENST00000606235 2172 ntBASIC1.04□□□□□ -2.24
CNOT1A5YKK6 SNRPEP3-201ENST00000338402 276 ntBASIC1.04□□□□□ -2.24
CNOT1A5YKK6 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CNOT1A5YKK6 RNU6-1072P-201ENST00000384703 107 ntBASIC1.04□□□□□ -2.24
CNOT1A5YKK6 RNU6-443P-201ENST00000384780 107 ntBASIC1.04□□□□□ -2.24
CNOT1A5YKK6 ARL2BPP3-201ENST00000421226 480 ntBASIC1.04□□□□□ -2.24
CNOT1A5YKK6 AC244035.1-201ENST00000430042 390 ntBASIC1.04□□□□□ -2.24
CNOT1A5YKK6 AC000111.3-201ENST00000433478 193 ntBASIC1.04□□□□□ -2.24
CNOT1A5YKK6 AC078857.1-201ENST00000469870 667 ntBASIC1.04□□□□□ -2.24
CNOT1A5YKK6 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CNOT1A5YKK6 MIR3973-201ENST00000579824 107 ntBASIC1.04□□□□□ -2.24
CNOT1A5YKK6 AL590282.1-201ENST00000610379 1136 ntBASIC1.04□□□□□ -2.24
CNOT1A5YKK6 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.04□□□□□ -2.24
CNOT1A5YKK6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
CNOT1A5YKK6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.04□□□□□ -2.24
CNOT1A5YKK6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CNOT1A5YKK6 RNU6-335P-201ENST00000364563 113 ntBASIC1.04□□□□□ -2.24
CNOT1A5YKK6 MIR532-201ENST00000385025 91 ntBASIC1.04□□□□□ -2.24
CNOT1A5YKK6 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.04□□□□□ -2.24
CNOT1A5YKK6 SDCBPP1-201ENST00000440192 890 ntBASIC1.04□□□□□ -2.24
CNOT1A5YKK6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.04□□□□□ -2.24
CNOT1A5YKK6 AC090096.1-201ENST00000489168 390 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms