Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AC098591.2-201ENST00000510152 315 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 RNU6-1102P-201ENST00000516149 96 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 RNU6-528P-201ENST00000516926 100 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 HSPA8P13-201ENST00000523715 472 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 MIR4298-201ENST00000584380 73 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AC010928.2-201ENST00000588017 287 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 ZNF92P2-201ENST00000600543 1059 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AP001429.1-201ENST00000602568 530 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AC025165.5-201ENST00000602802 578 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AP003973.1-201ENST00000604639 691 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AC007349.4-201ENST00000608114 532 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AC004067.1-201ENST00000608733 700 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AC004908.2-201ENST00000609090 574 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AC103710.1-201ENST00000610003 901 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 FTX_3.1-201ENST00000610451 147 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AL161423.1-201ENST00000613700 262 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AL596245.1-201ENST00000618994 362 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AC131280.1-202ENST00000624067 4211 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 AL390862.1-201ENST00000635467 1469 ntBASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
TRAV1-1A0A0B4J248 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 MIR506-201ENST00000384998 124 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 RNU2-20P-201ENST00000410425 191 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 PGBD4P6-201ENST00000421501 610 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 OOSP1P1-201ENST00000423265 274 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 AL445646.1-201ENST00000431784 216 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 RPS15AP5-201ENST00000436276 388 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 Z80107.1-201ENST00000436830 412 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 AC016691.1-201ENST00000441321 413 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 AL513124.1-201ENST00000450410 614 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 RN7SL429P-201ENST00000479090 223 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 RN7SL489P-201ENST00000486185 223 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 RN7SL327P-201ENST00000488659 223 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 ANXA2P1-201ENST00000505539 926 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 RNU6-751P-201ENST00000516382 101 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 RNU7-193P-201ENST00000516723 65 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 AP003122.3-201ENST00000526316 255 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 AC010186.2-204ENST00000537668 439 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 AC008121.1-201ENST00000603244 268 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 OR4H6P-202ENST00000603819 340 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 SNRPGP19-201ENST00000603826 189 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 AC116312.1-201ENST00000606841 314 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 DUXAP10-204ENST00000612052 616 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 RN7SL853P-201ENST00000617250 223 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 AC244517.12-201ENST00000623581 663 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.4□□□□□ -2.19
TRAV1-1A0A0B4J248 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 AC006020.1-201ENST00000420179 1854 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 WWP1P1-201ENST00000466609 2769 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 RNU6-1066P-201ENST00000363573 105 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 RNA5SP363-201ENST00000365072 115 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 RNU6-650P-201ENST00000365658 111 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 RNU6-1083P-201ENST00000384022 107 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 RNU6-253P-201ENST00000384730 105 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 MIR676-201ENST00000390702 67 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 MIR888-201ENST00000401186 77 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 CIR1P3-201ENST00000405137 479 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 RN7SKP284-201ENST00000411002 343 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 AC096649.2-201ENST00000416186 393 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 AC027644.1-201ENST00000419595 298 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 AL512661.1-201ENST00000434586 1253 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 RPL35AP22-201ENST00000436855 335 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 COX6CP18-201ENST00000448769 222 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms