Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PCDHGA4Q9Y5G9 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.96□□□□□ -1.45
PCDHGA4Q9Y5G9 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 RNU4-10P-201ENST00000364383 140 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 SNORD116-21-201ENST00000384507 92 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 RNU6-768P-201ENST00000384683 107 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 MIR487A-201ENST00000385009 80 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 MIR616-201ENST00000385293 97 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 RNU2-54P-201ENST00000410299 190 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 RNY4P29-201ENST00000410801 97 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 RPL21P66-201ENST00000426566 466 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 AC023141.3-201ENST00000436698 278 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 AL663074.2-201ENST00000440621 479 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 AL078601.1-201ENST00000444542 271 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 IGHV5-78-201ENST00000450948 295 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 AC092798.1-201ENST00000458542 409 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 ACA64.1-201ENST00000459171 127 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 TOMM22P4-201ENST00000511318 336 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 AC091874.1-201ENST00000511402 339 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 SNORD33.1-201ENST00000516213 88 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 RNU6-638P-201ENST00000516582 104 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 AC051619.2-201ENST00000559063 397 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 AL391813.1-201ENST00000603098 260 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 AC131238.1-201ENST00000617135 328 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 AC027309.3-201ENST00000623419 351 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 ZNF702P-202ENST00000434269 1966 ntBASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
PCDHGA4Q9Y5G9 AP001541.1-201ENST00000623322 1904 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 AC133552.1-201ENST00000569988 4007 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 MIR450A1-201ENST00000362262 91 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 RNA5SP110-201ENST00000362638 115 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 RNA5SP477-201ENST00000362639 119 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 RNU5F-3P-201ENST00000363767 117 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 SNORA43.1-201ENST00000364863 140 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 Y_RNA.293-201ENST00000364908 93 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 RNU6-1310P-201ENST00000384153 107 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 U3.19-201ENST00000390893 196 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 AC119751.6-201ENST00000416712 186 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 BX276092.6-201ENST00000430476 250 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 AL031737.1-201ENST00000450125 223 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 BX276092.8-201ENST00000455722 250 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 RN7SL273P-201ENST00000481561 299 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 AC008945.1-201ENST00000505144 499 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 SCARNA8-201ENST00000515924 131 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 RNU6-453P-201ENST00000516819 85 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 AC027369.5-201ENST00000533838 755 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 AC083809.1-201ENST00000615051 472 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 AC134026.1-201ENST00000623249 2239 ntBASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA4Q9Y5G9 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 MTND5P35-201ENST00000557537 1720 ntBASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHGA4Q9Y5G9 AC004656.1-201ENST00000568479 4951 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms