Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RNU7-23P-201ENST00000459465 62 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 RPL21P41-201ENST00000459863 264 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 MTCO2P6-201ENST00000463134 685 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AC008481.1-201ENST00000463278 396 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AC025881.1-201ENST00000518851 512 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AC090888.1-201ENST00000561335 1141 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AL157394.1-201ENST00000562983 1224 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AC034105.3-201ENST00000565294 442 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AC091489.2-201ENST00000566263 604 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 WISP1-OT1-201ENST00000602893 642 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 DUXAP4-201ENST00000603046 613 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AC015871.2-201ENST00000603605 948 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AC093732.2-201ENST00000607950 274 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AC131902.3-201ENST00000611767 581 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 MIR7844-201ENST00000616161 122 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AL603755.1-201ENST00000619504 163 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AC068880.5-201ENST00000624331 290 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 ZNF519P1-201ENST00000449011 1626 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.97
ATG4BQ9Y4P1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 Z82195.2-201ENST00000612348 18351 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AC000403.1-201ENST00000613696 3585 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 Y_RNA.46-201ENST00000362695 102 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 U8.9-201ENST00000365667 134 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 SNORA26.7-201ENST00000391288 122 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 RPS20P2-201ENST00000402520 389 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AL031577.2-201ENST00000404133 280 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 ATG3P1-201ENST00000419507 911 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 HMGN2P30-201ENST00000423237 256 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 MTND1P30-201ENST00000441241 901 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AC118469.1-201ENST00000442943 488 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 EPS15P1-201ENST00000448836 336 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AC098826.2-201ENST00000452011 651 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AC080014.1-201ENST00000496877 1201 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 RNU6-927P-201ENST00000516199 100 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AC123904.3-201ENST00000547218 814 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AC010653.1-201ENST00000571108 881 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AC105129.3-201ENST00000605455 485 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AC239868.4-201ENST00000608318 671 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AC004696.1-201ENST00000614345 607 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AC027807.2-201ENST00000616099 408 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AC008147.4-201ENST00000617570 1204 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AC091931.1-201ENST00000623488 728 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AL136313.1-201ENST00000624804 202 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AC084035.1-201ENST00000634543 607 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 AC097655.1-201ENST00000635075 318 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 MTND5P19-201ENST00000424872 1794 ntBASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.77□□□□□ -1.97
ATG4BQ9Y4P1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 RNU6-533P-201ENST00000384144 107 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 RNU6-278P-201ENST00000390945 109 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 MIR1289-1-201ENST00000408836 144 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 AC107081.1-201ENST00000414975 361 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 MTND2P18-201ENST00000419962 1030 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 AL645937.1-202ENST00000421799 937 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 AC007919.1-201ENST00000429380 217 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 MTATP6P17-201ENST00000431030 672 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 AL049734.2-201ENST00000441066 616 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms