Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 RPS20P2-201ENST00000402520 389 ntBASIC5.64□□□□□ -1.51
COL17A1Q9UMD9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.64□□□□□ -1.51
COL17A1Q9UMD9 AC093151.1-201ENST00000427711 313 ntBASIC5.64□□□□□ -1.51
COL17A1Q9UMD9 AC128713.1-201ENST00000471495 306 ntBASIC5.64□□□□□ -1.51
COL17A1Q9UMD9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.64□□□□□ -1.51
COL17A1Q9UMD9 SNORA25.10-201ENST00000515926 124 ntBASIC5.64□□□□□ -1.51
COL17A1Q9UMD9 RNU6-138P-201ENST00000515952 107 ntBASIC5.64□□□□□ -1.51
COL17A1Q9UMD9 RNA5SP164-201ENST00000516533 110 ntBASIC5.64□□□□□ -1.51
COL17A1Q9UMD9 RNU6-182P-201ENST00000516970 105 ntBASIC5.64□□□□□ -1.51
COL17A1Q9UMD9 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.64□□□□□ -1.51
COL17A1Q9UMD9 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.64□□□□□ -1.51
COL17A1Q9UMD9 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.64□□□□□ -1.51
COL17A1Q9UMD9 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.64□□□□□ -1.51
COL17A1Q9UMD9 BBIP1P1-201ENST00000602999 279 ntBASIC5.64□□□□□ -1.51
COL17A1Q9UMD9 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 MIR449A-201ENST00000362113 91 ntBASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 RPL23AP32-201ENST00000395315 459 ntBASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 AL133384.1-201ENST00000412744 351 ntBASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 RPL31P12-201ENST00000422587 358 ntBASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 MTCO3P2-201ENST00000457365 171 ntBASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 MIR2053-201ENST00000459295 91 ntBASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 AC026410.2-201ENST00000460281 156 ntBASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 RPL22P13-201ENST00000493291 347 ntBASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 AC015911.1-201ENST00000495111 156 ntBASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 TTC39CP1-201ENST00000512513 755 ntBASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 HIGD1AP3-201ENST00000515857 278 ntBASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 RNU6-201P-201ENST00000517100 61 ntBASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 AC008687.2-201ENST00000597865 520 ntBASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 AC104662.1-201ENST00000604448 511 ntBASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 AC009161.2-201ENST00000624626 138 ntBASIC5.63□□□□□ -1.51
COL17A1Q9UMD9 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 MTND5P10-201ENST00000603719 1809 ntBASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 RNU6-984P-201ENST00000363236 109 ntBASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 RNU6-1109P-201ENST00000391187 107 ntBASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 RNU6-370P-201ENST00000411008 104 ntBASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 AC080125.1-201ENST00000414888 684 ntBASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 DUTP6-201ENST00000425573 462 ntBASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 OR2AS1P-201ENST00000427827 319 ntBASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 SRIP2-201ENST00000428470 166 ntBASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 RPL23AP74-201ENST00000437246 471 ntBASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 RPS17P13-201ENST00000448974 407 ntBASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 PRELID3BP1-201ENST00000457142 540 ntBASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 RNU6-261P-201ENST00000459506 102 ntBASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 AC008571.1-201ENST00000467232 300 ntBASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 AP001025.2-201ENST00000490908 477 ntBASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 PCBP2P3-201ENST00000509726 843 ntBASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 Y_RNA.721-201ENST00000517207 102 ntBASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 MAGOH2P-202ENST00000584384 429 ntBASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 AC115085.1-201ENST00000588924 229 ntBASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 AC121334.2-201ENST00000605387 271 ntBASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 AC097714.1-201ENST00000511272 1647 ntBASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL17A1Q9UMD9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
COL17A1Q9UMD9 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL17A1Q9UMD9 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL17A1Q9UMD9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL17A1Q9UMD9 AL049641.1-201ENST00000441055 1948 ntBASIC5.61□□□□□ -1.51
COL17A1Q9UMD9 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL17A1Q9UMD9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
COL17A1Q9UMD9 RNY1P12-201ENST00000364251 105 ntBASIC5.61□□□□□ -1.51
COL17A1Q9UMD9 Y_RNA.364-201ENST00000365532 101 ntBASIC5.61□□□□□ -1.51
COL17A1Q9UMD9 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL17A1Q9UMD9 RNU6-432P-201ENST00000384196 109 ntBASIC5.61□□□□□ -1.51
COL17A1Q9UMD9 Y_RNA.455-201ENST00000384230 98 ntBASIC5.61□□□□□ -1.51
COL17A1Q9UMD9 RPS4XP8-201ENST00000402039 771 ntBASIC5.61□□□□□ -1.51
COL17A1Q9UMD9 RPL7AP73-201ENST00000413490 353 ntBASIC5.61□□□□□ -1.51
COL17A1Q9UMD9 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.61□□□□□ -1.51
COL17A1Q9UMD9 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.61□□□□□ -1.51
COL17A1Q9UMD9 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.61□□□□□ -1.51
COL17A1Q9UMD9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms