Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 U8.14-201ENST00000390843 143 ntBASIC5.25□□□□□ -1.57
SHROOM4Q9ULL8 RPS4XP3-201ENST00000398541 413 ntBASIC5.25□□□□□ -1.57
SHROOM4Q9ULL8 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.25□□□□□ -1.57
SHROOM4Q9ULL8 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.25□□□□□ -1.57
SHROOM4Q9ULL8 AL365184.2-201ENST00000431139 435 ntBASIC5.25□□□□□ -1.57
SHROOM4Q9ULL8 ELOCP30-201ENST00000447108 299 ntBASIC5.25□□□□□ -1.57
SHROOM4Q9ULL8 TPT1P14-201ENST00000448018 505 ntBASIC5.25□□□□□ -1.57
SHROOM4Q9ULL8 MTND4LP18-201ENST00000526864 291 ntBASIC5.25□□□□□ -1.57
SHROOM4Q9ULL8 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.25□□□□□ -1.57
SHROOM4Q9ULL8 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.25□□□□□ -1.57
SHROOM4Q9ULL8 AC091489.2-201ENST00000566263 604 ntBASIC5.25□□□□□ -1.57
SHROOM4Q9ULL8 AL138880.2-201ENST00000616214 239 ntBASIC5.25□□□□□ -1.57
SHROOM4Q9ULL8 AC012150.2-201ENST00000621300 544 ntBASIC5.25□□□□□ -1.57
SHROOM4Q9ULL8 AC093591.3-201ENST00000634516 308 ntBASIC5.25□□□□□ -1.57
SHROOM4Q9ULL8 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHROOM4Q9ULL8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHROOM4Q9ULL8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SHROOM4Q9ULL8 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 AL445523.1-201ENST00000451184 1362 ntBASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 U3.11-201ENST00000364476 212 ntBASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 MIR514A1-201ENST00000385133 98 ntBASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 AL109755.1-201ENST00000401791 649 ntBASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 AL513477.1-202ENST00000417061 214 ntBASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 NDUFB4P6-201ENST00000436819 366 ntBASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 AL590664.1-201ENST00000448065 339 ntBASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 AL359385.1-201ENST00000456509 365 ntBASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 AC003982.1-202ENST00000469928 248 ntBASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 AC092851.1-201ENST00000535964 478 ntBASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 AC103710.1-201ENST00000610003 901 ntBASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 AF246928.1-201ENST00000623768 87 ntBASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 AC120349.3-201ENST00000624377 529 ntBASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC5.24□□□□□ -1.57
SHROOM4Q9ULL8 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 ZNF72P-201ENST00000425869 1908 ntBASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 RNU5F-7P-201ENST00000363696 115 ntBASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 CCNG1P1-201ENST00000406783 885 ntBASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 VPS26BP1-201ENST00000417155 755 ntBASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 NDUFB4P7-201ENST00000423198 363 ntBASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 LARP1BP3-201ENST00000437229 869 ntBASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 RPL30P14-201ENST00000482744 348 ntBASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 AL049874.1-201ENST00000489560 388 ntBASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 AC005178.1-201ENST00000508392 440 ntBASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 AF038458.1-201ENST00000588406 262 ntBASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 AC010133.1-201ENST00000615809 842 ntBASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.23□□□□□ -1.57
SHROOM4Q9ULL8 AC092593.1-201ENST00000515413 1815 ntBASIC5.22□□□□□ -1.57
SHROOM4Q9ULL8 TPTE2P4-201ENST00000258589 1605 ntBASIC5.22□□□□□ -1.57
SHROOM4Q9ULL8 MIR19A-201ENST00000384878 82 ntBASIC5.22□□□□□ -1.57
SHROOM4Q9ULL8 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.22□□□□□ -1.57
SHROOM4Q9ULL8 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.22□□□□□ -1.57
SHROOM4Q9ULL8 RPL31P12-201ENST00000422587 358 ntBASIC5.22□□□□□ -1.57
SHROOM4Q9ULL8 CETN4P-201ENST00000432407 469 ntBASIC5.22□□□□□ -1.57
SHROOM4Q9ULL8 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.22□□□□□ -1.57
SHROOM4Q9ULL8 RPL22P17-201ENST00000438729 315 ntBASIC5.22□□□□□ -1.57
SHROOM4Q9ULL8 MTND1P30-201ENST00000441241 901 ntBASIC5.22□□□□□ -1.57
SHROOM4Q9ULL8 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.22□□□□□ -1.57
SHROOM4Q9ULL8 SCARNA15.2-201ENST00000516409 127 ntBASIC5.22□□□□□ -1.57
SHROOM4Q9ULL8 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.22□□□□□ -1.57
SHROOM4Q9ULL8 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.22□□□□□ -1.57
SHROOM4Q9ULL8 5S_rRNA.12-201ENST00000617631 107 ntBASIC5.22□□□□□ -1.57
SHROOM4Q9ULL8 AC092608.2-201ENST00000624427 218 ntBASIC5.22□□□□□ -1.57
SHROOM4Q9ULL8 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHROOM4Q9ULL8 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC5.22□□□□□ -1.57
SHROOM4Q9ULL8 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
SHROOM4Q9ULL8 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
SHROOM4Q9ULL8 MIR181A2-201ENST00000384863 110 ntBASIC5.21□□□□□ -1.58
SHROOM4Q9ULL8 RNA5SP247-201ENST00000411181 105 ntBASIC5.21□□□□□ -1.58
SHROOM4Q9ULL8 AC009963.1-201ENST00000417265 157 ntBASIC5.21□□□□□ -1.58
SHROOM4Q9ULL8 USP12PX-201ENST00000432383 1057 ntBASIC5.21□□□□□ -1.58
SHROOM4Q9ULL8 AC092573.2-201ENST00000434546 243 ntBASIC5.21□□□□□ -1.58
SHROOM4Q9ULL8 RPS20P5-201ENST00000434808 360 ntBASIC5.21□□□□□ -1.58
SHROOM4Q9ULL8 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.21□□□□□ -1.58
SHROOM4Q9ULL8 AC090525.1-201ENST00000479116 478 ntBASIC5.21□□□□□ -1.58
SHROOM4Q9ULL8 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.21□□□□□ -1.58
SHROOM4Q9ULL8 RNA5SP148-201ENST00000516527 94 ntBASIC5.21□□□□□ -1.58
SHROOM4Q9ULL8 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.21□□□□□ -1.58
SHROOM4Q9ULL8 AL133153.1-201ENST00000557756 303 ntBASIC5.21□□□□□ -1.58
SHROOM4Q9ULL8 AC090970.3-201ENST00000612566 866 ntBASIC5.21□□□□□ -1.58
SHROOM4Q9ULL8 AC008147.4-201ENST00000617570 1204 ntBASIC5.21□□□□□ -1.58
SHROOM4Q9ULL8 AC025034.2-201ENST00000623264 286 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms