Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 AC010632.3-201ENST00000611377 369 ntBASIC5.66□□□□□ -1.5
TSR3Q9UJK0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.66□□□□□ -1.5
TSR3Q9UJK0 AP001005.3-201ENST00000622049 129 ntBASIC5.66□□□□□ -1.5
TSR3Q9UJK0 AC048347.1-201ENST00000624621 427 ntBASIC5.66□□□□□ -1.5
TSR3Q9UJK0 snoZ196.1-201ENST00000625269 89 ntBASIC5.66□□□□□ -1.5
TSR3Q9UJK0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
TSR3Q9UJK0 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TSR3Q9UJK0 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TSR3Q9UJK0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TSR3Q9UJK0 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.66□□□□□ -1.5
TSR3Q9UJK0 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TSR3Q9UJK0 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
TSR3Q9UJK0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.66□□□□□ -1.5
TSR3Q9UJK0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.66□□□□□ -1.5
TSR3Q9UJK0 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TSR3Q9UJK0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.65□□□□□ -1.5
TSR3Q9UJK0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TSR3Q9UJK0 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TSR3Q9UJK0 RNA5SP234-201ENST00000363916 119 ntBASIC5.65□□□□□ -1.5
TSR3Q9UJK0 RNU6-1286P-201ENST00000383871 107 ntBASIC5.65□□□□□ -1.5
TSR3Q9UJK0 MIR621-201ENST00000384919 96 ntBASIC5.65□□□□□ -1.5
TSR3Q9UJK0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TSR3Q9UJK0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.65□□□□□ -1.5
TSR3Q9UJK0 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.65□□□□□ -1.5
TSR3Q9UJK0 RPL31P61-201ENST00000496160 376 ntBASIC5.65□□□□□ -1.5
TSR3Q9UJK0 RN7SKP277-201ENST00000516895 283 ntBASIC5.65□□□□□ -1.5
TSR3Q9UJK0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.65□□□□□ -1.5
TSR3Q9UJK0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.65□□□□□ -1.5
TSR3Q9UJK0 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.65□□□□□ -1.5
TSR3Q9UJK0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC5.65□□□□□ -1.5
TSR3Q9UJK0 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TSR3Q9UJK0 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.65□□□□□ -1.5
TSR3Q9UJK0 AC024153.1-201ENST00000603103 365 ntBASIC5.65□□□□□ -1.5
TSR3Q9UJK0 AL354798.1-201ENST00000622505 329 ntBASIC5.65□□□□□ -1.5
TSR3Q9UJK0 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.65□□□□□ -1.51
TSR3Q9UJK0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.65□□□□□ -1.51
TSR3Q9UJK0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
TSR3Q9UJK0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
TSR3Q9UJK0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TSR3Q9UJK0 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
TSR3Q9UJK0 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 RNU5E-7P-201ENST00000365290 117 ntBASIC5.64□□□□□ -1.51
TSR3Q9UJK0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 MIR130A-201ENST00000385274 89 ntBASIC5.64□□□□□ -1.51
TSR3Q9UJK0 AC006461.1-201ENST00000412637 326 ntBASIC5.64□□□□□ -1.51
TSR3Q9UJK0 AL158823.1-201ENST00000418441 478 ntBASIC5.64□□□□□ -1.51
TSR3Q9UJK0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 AC010265.1-201ENST00000513509 211 ntBASIC5.64□□□□□ -1.51
TSR3Q9UJK0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 AC021269.2-201ENST00000532318 330 ntBASIC5.64□□□□□ -1.51
TSR3Q9UJK0 NACAP3-201ENST00000552100 481 ntBASIC5.64□□□□□ -1.51
TSR3Q9UJK0 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 AC126615.2-201ENST00000553003 515 ntBASIC5.64□□□□□ -1.51
TSR3Q9UJK0 DEFB117-201ENST00000602356 141 ntBASIC5.64□□□□□ -1.51
TSR3Q9UJK0 AC108081.1-201ENST00000604358 221 ntBASIC5.64□□□□□ -1.51
TSR3Q9UJK0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.64□□□□□ -1.51
TSR3Q9UJK0 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 MIR3914-2-201ENST00000637339 95 ntBASIC5.64□□□□□ -1.51
TSR3Q9UJK0 AC068647.2-201ENST00000637380 353 ntBASIC5.64□□□□□ -1.51
TSR3Q9UJK0 AC000095.2-202ENST00000637415 154 ntBASIC5.64□□□□□ -1.51
TSR3Q9UJK0 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
TSR3Q9UJK0 AF127577.6-201ENST00000623352 2191 ntBASIC5.63□□□□□ -1.51
TSR3Q9UJK0 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TSR3Q9UJK0 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TSR3Q9UJK0 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.63□□□□□ -1.51
TSR3Q9UJK0 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
TSR3Q9UJK0 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.63□□□□□ -1.51
TSR3Q9UJK0 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
TSR3Q9UJK0 AL159987.1-201ENST00000347911 293 ntBASIC5.63□□□□□ -1.51
TSR3Q9UJK0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TSR3Q9UJK0 RNU1-150P-201ENST00000362491 162 ntBASIC5.63□□□□□ -1.51
TSR3Q9UJK0 SNORA64.1-201ENST00000362600 132 ntBASIC5.63□□□□□ -1.51
TSR3Q9UJK0 RNA5SP326-201ENST00000363209 110 ntBASIC5.63□□□□□ -1.51
TSR3Q9UJK0 RNU6-1180P-201ENST00000364935 107 ntBASIC5.63□□□□□ -1.51
TSR3Q9UJK0 Y_RNA.319-201ENST00000365138 92 ntBASIC5.63□□□□□ -1.51
TSR3Q9UJK0 RNA5SP56-201ENST00000410277 118 ntBASIC5.63□□□□□ -1.51
TSR3Q9UJK0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.63□□□□□ -1.51
TSR3Q9UJK0 RPL7AP61-201ENST00000443410 636 ntBASIC5.63□□□□□ -1.51
TSR3Q9UJK0 RPL36AP41-201ENST00000493820 306 ntBASIC5.63□□□□□ -1.51
TSR3Q9UJK0 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.63□□□□□ -1.51
TSR3Q9UJK0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.63□□□□□ -1.51
TSR3Q9UJK0 HMGN2P36-201ENST00000529541 409 ntBASIC5.63□□□□□ -1.51
TSR3Q9UJK0 AC109810.1-201ENST00000534066 224 ntBASIC5.63□□□□□ -1.51
TSR3Q9UJK0 AC096996.1-201ENST00000563813 325 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms