Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AL390862.1-201ENST00000635467 1469 ntBASIC1.43□□□□□ -2.18
SCN11AQ9UI33 RNA5SP252-201ENST00000391131 119 ntBASIC1.42□□□□□ -2.18
SCN11AQ9UI33 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
SCN11AQ9UI33 AC009296.1-201ENST00000443146 155 ntBASIC1.42□□□□□ -2.18
SCN11AQ9UI33 AC108059.3-201ENST00000456388 214 ntBASIC1.42□□□□□ -2.18
SCN11AQ9UI33 AC110792.2-201ENST00000510278 224 ntBASIC1.42□□□□□ -2.18
SCN11AQ9UI33 CASP1P1-201ENST00000526345 212 ntBASIC1.42□□□□□ -2.18
SCN11AQ9UI33 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.42□□□□□ -2.18
SCN11AQ9UI33 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.42□□□□□ -2.18
SCN11AQ9UI33 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.42□□□□□ -2.18
SCN11AQ9UI33 AC097655.1-201ENST00000635075 318 ntBASIC1.42□□□□□ -2.18
SCN11AQ9UI33 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.42□□□□□ -2.18
SCN11AQ9UI33 CIR1P3-201ENST00000405137 479 ntBASIC1.42□□□□□ -2.18
SCN11AQ9UI33 HMGB1P49-201ENST00000418882 569 ntBASIC1.42□□□□□ -2.18
SCN11AQ9UI33 RPL31P20-201ENST00000449593 360 ntBASIC1.42□□□□□ -2.18
SCN11AQ9UI33 AC097493.1-201ENST00000463958 372 ntBASIC1.42□□□□□ -2.18
SCN11AQ9UI33 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.42□□□□□ -2.18
SCN11AQ9UI33 AC243773.3-201ENST00000613270 256 ntBASIC1.42□□□□□ -2.18
SCN11AQ9UI33 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.41□□□□□ -2.18
SCN11AQ9UI33 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.41□□□□□ -2.18
SCN11AQ9UI33 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.41□□□□□ -2.18
SCN11AQ9UI33 RNU6-113P-201ENST00000516653 101 ntBASIC1.41□□□□□ -2.18
SCN11AQ9UI33 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.41□□□□□ -2.18
SCN11AQ9UI33 MIR4287-201ENST00000579398 78 ntBASIC1.41□□□□□ -2.18
SCN11AQ9UI33 MIR4714-201ENST00000580728 77 ntBASIC1.41□□□□□ -2.18
SCN11AQ9UI33 COX6CP3-201ENST00000580869 223 ntBASIC1.41□□□□□ -2.18
SCN11AQ9UI33 AL161423.1-201ENST00000613700 262 ntBASIC1.41□□□□□ -2.18
SCN11AQ9UI33 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.41□□□□□ -2.18
SCN11AQ9UI33 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.41□□□□□ -2.18
SCN11AQ9UI33 MIR373-201ENST00000362273 69 ntBASIC1.4□□□□□ -2.19
SCN11AQ9UI33 RNU6-193P-201ENST00000410977 107 ntBASIC1.4□□□□□ -2.19
SCN11AQ9UI33 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.4□□□□□ -2.19
SCN11AQ9UI33 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.4□□□□□ -2.19
SCN11AQ9UI33 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.4□□□□□ -2.19
SCN11AQ9UI33 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SCN11AQ9UI33 AP005597.4-201ENST00000526762 229 ntBASIC1.4□□□□□ -2.19
SCN11AQ9UI33 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SCN11AQ9UI33 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.4□□□□□ -2.19
SCN11AQ9UI33 AC113194.1-201ENST00000606037 500 ntBASIC1.4□□□□□ -2.19
SCN11AQ9UI33 AL627230.6-201ENST00000611129 280 ntBASIC1.4□□□□□ -2.19
SCN11AQ9UI33 AC109809.1-201ENST00000619665 545 ntBASIC1.4□□□□□ -2.19
SCN11AQ9UI33 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.39□□□□□ -2.19
SCN11AQ9UI33 RNU1-62P-201ENST00000362599 164 ntBASIC1.39□□□□□ -2.19
SCN11AQ9UI33 U8.3-201ENST00000363321 132 ntBASIC1.39□□□□□ -2.19
SCN11AQ9UI33 SNORA62.1-201ENST00000364287 154 ntBASIC1.39□□□□□ -2.19
SCN11AQ9UI33 RNU4-42P-201ENST00000364738 142 ntBASIC1.39□□□□□ -2.19
SCN11AQ9UI33 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.39□□□□□ -2.19
SCN11AQ9UI33 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
SCN11AQ9UI33 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.39□□□□□ -2.19
SCN11AQ9UI33 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.39□□□□□ -2.19
SCN11AQ9UI33 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.39□□□□□ -2.19
SCN11AQ9UI33 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.39□□□□□ -2.19
SCN11AQ9UI33 VN1R107P-201ENST00000601784 209 ntBASIC1.39□□□□□ -2.19
SCN11AQ9UI33 AC004908.2-201ENST00000609090 574 ntBASIC1.39□□□□□ -2.19
SCN11AQ9UI33 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SCN11AQ9UI33 AL449363.1-201ENST00000617815 186 ntBASIC1.39□□□□□ -2.19
SCN11AQ9UI33 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.39□□□□□ -2.19
SCN11AQ9UI33 AC005534.2-201ENST00000431047 433 ntBASIC1.39□□□□□ -2.19
SCN11AQ9UI33 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.39□□□□□ -2.19
SCN11AQ9UI33 OSTCP8-201ENST00000445117 448 ntBASIC1.39□□□□□ -2.19
SCN11AQ9UI33 OR6K5P-201ENST00000447050 945 ntBASIC1.39□□□□□ -2.19
SCN11AQ9UI33 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.39□□□□□ -2.19
SCN11AQ9UI33 AC022447.3-201ENST00000506865 495 ntBASIC1.39□□□□□ -2.19
SCN11AQ9UI33 RNA5SP384-201ENST00000516615 116 ntBASIC1.39□□□□□ -2.19
SCN11AQ9UI33 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.39□□□□□ -2.19
SCN11AQ9UI33 AC068880.5-201ENST00000624331 290 ntBASIC1.39□□□□□ -2.19
SCN11AQ9UI33 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.38□□□□□ -2.19
SCN11AQ9UI33 RNU6-1105P-201ENST00000384774 107 ntBASIC1.38□□□□□ -2.19
SCN11AQ9UI33 SNRPEP10-201ENST00000420249 274 ntBASIC1.38□□□□□ -2.19
SCN11AQ9UI33 AL445305.1-201ENST00000432577 575 ntBASIC1.38□□□□□ -2.19
SCN11AQ9UI33 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.38□□□□□ -2.19
SCN11AQ9UI33 AL357134.1-201ENST00000445848 426 ntBASIC1.38□□□□□ -2.19
SCN11AQ9UI33 RPS24P6-201ENST00000452670 400 ntBASIC1.38□□□□□ -2.19
SCN11AQ9UI33 RN7SKP277-201ENST00000516895 283 ntBASIC1.38□□□□□ -2.19
SCN11AQ9UI33 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.38□□□□□ -2.19
SCN11AQ9UI33 AC011472.4-201ENST00000615848 491 ntBASIC1.38□□□□□ -2.19
SCN11AQ9UI33 AC091932.3-201ENST00000624223 323 ntBASIC1.38□□□□□ -2.19
SCN11AQ9UI33 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.38□□□□□ -2.19
SCN11AQ9UI33 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SCN11AQ9UI33 AC068050.1-201ENST00000394891 380 ntBASIC1.37□□□□□ -2.19
SCN11AQ9UI33 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.37□□□□□ -2.19
SCN11AQ9UI33 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.37□□□□□ -2.19
SCN11AQ9UI33 CABYRP1-201ENST00000465493 1045 ntBASIC1.37□□□□□ -2.19
SCN11AQ9UI33 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.37□□□□□ -2.19
SCN11AQ9UI33 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.37□□□□□ -2.19
SCN11AQ9UI33 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.37□□□□□ -2.19
SCN11AQ9UI33 AL355297.2-201ENST00000604792 129 ntBASIC1.37□□□□□ -2.19
SCN11AQ9UI33 AL020996.3-201ENST00000606617 222 ntBASIC1.37□□□□□ -2.19
SCN11AQ9UI33 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.37□□□□□ -2.19
SCN11AQ9UI33 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SCN11AQ9UI33 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SCN11AQ9UI33 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
SCN11AQ9UI33 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
SCN11AQ9UI33 PTGES3P2-201ENST00000407942 482 ntBASIC1.36□□□□□ -2.19
SCN11AQ9UI33 AIMP1P2-201ENST00000425294 312 ntBASIC1.36□□□□□ -2.19
SCN11AQ9UI33 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.36□□□□□ -2.19
SCN11AQ9UI33 UBE2V1P6-201ENST00000430840 422 ntBASIC1.36□□□□□ -2.19
SCN11AQ9UI33 AP000949.1-201ENST00000438328 629 ntBASIC1.36□□□□□ -2.19
SCN11AQ9UI33 RNA5SP476-201ENST00000516613 103 ntBASIC1.36□□□□□ -2.19
SCN11AQ9UI33 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms