Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 SUB1P1-201ENST00000524415 382 ntBASIC3.95□□□□□ -1.78
DKK3Q9UBP4 AC128657.1-201ENST00000549459 145 ntBASIC3.95□□□□□ -1.78
DKK3Q9UBP4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.95□□□□□ -1.78
DKK3Q9UBP4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.95□□□□□ -1.78
DKK3Q9UBP4 OR4K8P-201ENST00000578842 1048 ntBASIC3.95□□□□□ -1.78
DKK3Q9UBP4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.95□□□□□ -1.78
DKK3Q9UBP4 AC010525.2-201ENST00000590920 195 ntBASIC3.95□□□□□ -1.78
DKK3Q9UBP4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.95□□□□□ -1.78
DKK3Q9UBP4 AC016727.1-205ENST00000605437 569 ntBASIC3.95□□□□□ -1.78
DKK3Q9UBP4 AC006023.2-201ENST00000609916 167 ntBASIC3.95□□□□□ -1.78
DKK3Q9UBP4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.95□□□□□ -1.78
DKK3Q9UBP4 AC004972.1-201ENST00000623934 2209 ntBASIC3.95□□□□□ -1.78
DKK3Q9UBP4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
DKK3Q9UBP4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
DKK3Q9UBP4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
DKK3Q9UBP4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.95□□□□□ -1.78
DKK3Q9UBP4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 AL139276.1-201ENST00000311910 1001 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 NACAP2-201ENST00000318548 624 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 RNU4-73P-201ENST00000363164 141 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 SNORD81.2-201ENST00000365153 76 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 Y_RNA.356-201ENST00000365475 113 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 RNU6-516P-201ENST00000411381 104 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 RPS20P15-201ENST00000412792 311 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 PDCL2P1-201ENST00000419302 352 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 MTCO3P46-201ENST00000425787 232 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 RPL21P66-201ENST00000426566 466 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 AC008850.1-201ENST00000427546 362 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 RPL36AP6-201ENST00000435770 321 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 RPS29P7-201ENST00000439662 171 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 SNORA59A-201ENST00000459326 152 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 EIF4EP3-201ENST00000498782 656 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 AL133271.1-201ENST00000538229 291 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 CR383656.7-201ENST00000548164 174 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 GNRHR2P1-201ENST00000555315 631 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 HSPE1P5-201ENST00000561489 272 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 MIR5685-201ENST00000579080 79 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 AL669831.4-202ENST00000590817 238 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 AP001429.1-201ENST00000602568 530 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 AL121992.2-201ENST00000606262 256 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 AP001486.3-201ENST00000615334 372 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 AC079684.1-201ENST00000621405 437 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 PLCE1P1-201ENST00000622094 305 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 MTND1P37-201ENST00000636562 264 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 AC112487.2-201ENST00000637950 304 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 AC090337.1-201ENST00000579651 2074 ntBASIC3.94□□□□□ -1.78
DKK3Q9UBP4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.94□□□□□ -1.78
DKK3Q9UBP4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
DKK3Q9UBP4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.93□□□□□ -1.78
DKK3Q9UBP4 OR4G1P-203ENST00000641984 1631 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
DKK3Q9UBP4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
DKK3Q9UBP4 Y_RNA.111-201ENST00000363248 100 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 RNU6-637P-201ENST00000384050 107 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 MIR491-201ENST00000384877 84 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 MIR199A2-201ENST00000385289 110 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 SNORA3.3-201ENST00000408712 125 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 RN7SKP32-201ENST00000410167 303 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 RNU2-47P-201ENST00000410649 186 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 RNU6-193P-201ENST00000410977 107 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.93□□□□□ -1.78
DKK3Q9UBP4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.93□□□□□ -1.78
DKK3Q9UBP4 MTATP6P16-201ENST00000434543 526 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 AC005094.1-201ENST00000440420 368 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.93□□□□□ -1.78
DKK3Q9UBP4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.93□□□□□ -1.78
DKK3Q9UBP4 AC010655.1-201ENST00000449336 292 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.93□□□□□ -1.78
DKK3Q9UBP4 RPL23AP14-201ENST00000468281 468 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 AC006512.1-201ENST00000468816 291 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 AC135721.1-201ENST00000497954 479 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.93□□□□□ -1.78
DKK3Q9UBP4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.93□□□□□ -1.78
DKK3Q9UBP4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.93□□□□□ -1.78
DKK3Q9UBP4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.93□□□□□ -1.78
DKK3Q9UBP4 MIR4775-201ENST00000581168 75 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms