Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 MIR6817-201ENST00000615588 66 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AC010133.1-201ENST00000615809 842 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 CR381653.2-201ENST00000624041 768 ntBASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CLCF1Q9UBD9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 AC092125.1-201ENST00000562568 1995 ntBASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 AL391994.1-201ENST00000254724 282 ntBASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 Y_RNA.302-201ENST00000364997 102 ntBASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 RNU1-39P-201ENST00000383897 165 ntBASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 RNU6-769P-201ENST00000384407 104 ntBASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 RNU6-1035P-201ENST00000384477 107 ntBASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 RN7SKP140-201ENST00000411196 284 ntBASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 Z85995.1-201ENST00000415547 335 ntBASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 XKRYP1-201ENST00000423438 492 ntBASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 XKRYP2-201ENST00000432915 492 ntBASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 AL135752.1-201ENST00000479477 471 ntBASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 RNA5SP291-201ENST00000517222 105 ntBASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 NRON-201ENST00000517270 370 ntBASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 MTCO3P13-201ENST00000577757 781 ntBASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 SDR42E1P2-201ENST00000614861 481 ntBASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 AL161629.2-201ENST00000615347 275 ntBASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 AC091965.5-201ENST00000624785 342 ntBASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CLCF1Q9UBD9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.34□□□□□ -2.04
CLCF1Q9UBD9 AC091564.4-201ENST00000533934 2194 ntBASIC2.34□□□□□ -2.04
CLCF1Q9UBD9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
CLCF1Q9UBD9 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.34□□□□□ -2.04
CLCF1Q9UBD9 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AC022336.2-201ENST00000568966 2538 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 RNU4-82P-201ENST00000362443 140 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 SNORD62.1-201ENST00000362541 86 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 RNU6-1214P-201ENST00000363650 109 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 RNA5SP68-201ENST00000363885 119 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 RNA5SP139-201ENST00000364340 117 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 RNU6-198P-201ENST00000384258 104 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 RPL21P75-201ENST00000396599 483 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 RPL21P28-201ENST00000401418 483 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AL592114.1-201ENST00000403842 483 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 RPLP0P7-201ENST00000416050 667 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 MTND1P20-201ENST00000430341 950 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 MTCO3P45-201ENST00000443036 613 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 snoU13.28-201ENST00000459235 104 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 RPL21P39-201ENST00000463605 483 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AC008571.1-201ENST00000467232 300 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 RPL21P93-201ENST00000480465 489 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AC233702.1-201ENST00000482905 502 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AC087190.1-201ENST00000484462 480 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AC093591.1-201ENST00000491435 481 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 RPL21P16-201ENST00000495531 483 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 HSPE1P23-201ENST00000509838 286 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 LTV1P1-201ENST00000510683 1237 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 SNORA3.4-201ENST00000515969 96 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 RNU6-928P-201ENST00000516876 104 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 MTATP6P15-201ENST00000527233 835 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 TRAV28-201ENST00000557548 323 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 MIR4760-201ENST00000585040 80 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AC002545.1-201ENST00000592511 181 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AC112187.2-201ENST00000604345 283 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AC026790.2-201ENST00000606282 430 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AC103710.4-201ENST00000609301 899 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AL031667.3-201ENST00000620124 655 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AC073308.1-201ENST00000623696 305 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AC112204.3-201ENST00000623822 332 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AC243829.7-201ENST00000633081 225 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AL359693.1-201ENST00000614959 2407 ntBASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms