Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AC011933.1-201ENST00000413334 321 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 Z82205.1-201ENST00000428456 297 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 ABCF2P2-201ENST00000450549 296 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 RPL30P15-201ENST00000457129 321 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 RNU7-152P-201ENST00000458982 64 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 AC087884.1-201ENST00000469738 328 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 AC109327.1-201ENST00000471666 403 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 HSPE1P6-201ENST00000479457 291 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 AC090096.1-201ENST00000489168 390 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 RNU6-1069P-201ENST00000516612 133 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 RNU6-1332P-201ENST00000516666 104 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 RNU6-323P-201ENST00000521915 107 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 PARP1P2-201ENST00000556806 195 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 MTCO3P23-201ENST00000561363 289 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 AC023575.1-201ENST00000580510 358 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 AC012119.1-201ENST00000603184 222 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 SNRPGP17-201ENST00000603780 214 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 AC244517.12-201ENST00000623581 663 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 AC022418.1-201ENST00000624118 445 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
KCMF1Q9P0J7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.09□□□□□ -1.76
KCMF1Q9P0J7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
KCMF1Q9P0J7 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 RNU6-1188P-201ENST00000363795 107 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 Y_RNA.187-201ENST00000363918 113 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 Y_RNA.202-201ENST00000364083 110 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 RNU6-173P-201ENST00000364215 104 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 U3.15-201ENST00000365398 212 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 RHOT1P2-201ENST00000366423 333 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 AC068538.1-201ENST00000376856 336 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 Y_RNA.482-201ENST00000384377 111 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 RNU6-45P-201ENST00000384471 107 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 RNU6-601P-201ENST00000384540 107 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 AC245054.2-201ENST00000415639 319 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 AL157831.1-201ENST00000426134 473 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 SNAP23P1-201ENST00000433229 246 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 AL353748.1-201ENST00000440753 474 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 FGF7P3-201ENST00000454645 303 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 Y_RNA.653-201ENST00000459091 95 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 SNORD108-201ENST00000459332 71 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 AC130509.1-201ENST00000464158 433 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 AC108860.1-201ENST00000484521 383 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 AL049874.1-201ENST00000489560 388 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 AC009901.1-201ENST00000506703 541 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 AC104136.1-201ENST00000512969 394 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 AC012182.1-201ENST00000570133 895 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 MIR5690-201ENST00000583739 73 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 AC006504.6-201ENST00000590142 199 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 AC114781.5-201ENST00000615297 108 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 RMST_9.1-201ENST00000619945 193 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 AC140479.6-201ENST00000633535 357 ntBASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KCMF1Q9P0J7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 AC004925.1-201ENST00000624256 2706 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 MIR708-201ENST00000390708 88 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 AL360182.1-201ENST00000397433 468 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 AL139397.2-201ENST00000404529 772 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 AC004552.1-201ENST00000419089 348 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 GPM6BP2-201ENST00000432046 144 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 AF228730.2-201ENST00000438784 848 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 GPM6BP1-201ENST00000446387 144 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 RN7SL303P-201ENST00000469773 251 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms