Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AC009902.3-201ENST00000606235 2172 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 RNU6-859P-201ENST00000362728 107 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 RNU6-884P-201ENST00000363889 107 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 CCNG1P1-201ENST00000406783 885 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 VN1R51P-201ENST00000411675 945 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 ATP5F1P1-201ENST00000433775 569 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AC011816.1-201ENST00000441346 546 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 RPL21P134-201ENST00000453468 483 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AL139109.1-201ENST00000455491 297 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 RPL12P25-201ENST00000455592 494 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AC073901.1-201ENST00000462471 408 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AC105252.1-201ENST00000503089 286 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 MTND3P3-201ENST00000505004 126 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AC021146.8-201ENST00000507455 733 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AC114781.4-201ENST00000513707 639 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AC004486.1-201ENST00000546846 233 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AC009712.1-201ENST00000564938 316 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AC023824.2-201ENST00000566185 400 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 TMF1P1-201ENST00000576058 373 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AC069431.2-201ENST00000604149 1099 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AC107075.1-201ENST00000613695 314 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AL137003.2-201ENST00000606924 2538 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 AC006378.2-201ENST00000623178 2476 ntBASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.42□□□□□ -2.02
KLHL28Q9NXS3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 RNU6-777P-201ENST00000364265 104 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 MIR34A-201ENST00000385130 110 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 MIR524-201ENST00000385242 87 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 AC023141.4-201ENST00000412031 328 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 USP9YP33-201ENST00000412220 421 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 UBE2FP1-201ENST00000416536 447 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 USP9YP13-201ENST00000417797 480 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 HMGB1P49-201ENST00000418882 569 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 RPS3AP37-201ENST00000419176 745 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 USP9YP35-201ENST00000435696 412 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 RPS15AP5-201ENST00000436276 388 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 EEF1A1P39-201ENST00000440791 250 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 COX6CP12-201ENST00000446748 202 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 AP000705.1-201ENST00000454567 350 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 MTND2P39-201ENST00000457230 764 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 RPL26P9-201ENST00000457466 433 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 RPS29P20-201ENST00000489592 171 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 AL160314.1-201ENST00000490836 438 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 AC123904.3-201ENST00000547218 814 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 AL359212.1-201ENST00000556608 614 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 AC026790.2-201ENST00000606282 430 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 AC135507.1-201ENST00000607214 561 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 AC239868.4-201ENST00000608318 671 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 AL049777.1-201ENST00000622740 518 ntBASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.41□□□□□ -2.02
KLHL28Q9NXS3 AC004944.1-201ENST00000517807 3059 ntBASIC2.4□□□□□ -2.02
KLHL28Q9NXS3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.4□□□□□ -2.02
KLHL28Q9NXS3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 RNU4-82P-201ENST00000362443 140 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 Y_RNA.192-201ENST00000363977 102 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 DEFA7P-201ENST00000382676 285 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 RNU1-52P-201ENST00000384190 164 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 RPLP0P7-201ENST00000416050 667 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 USP9YP20-201ENST00000419224 558 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 SEPT2P1-201ENST00000419651 180 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 RPS25P9-201ENST00000435591 252 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 RPS12P2-201ENST00000439728 269 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 MTCO3P45-201ENST00000443036 613 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AP000936.2-201ENST00000447151 681 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 PAXBP1P1-201ENST00000449315 447 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 RN7SL429P-201ENST00000479090 223 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms