Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 ATP1B3P1-201ENST00000605365 821 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AC018645.2-201ENST00000609151 472 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AC092608.2-201ENST00000624427 218 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AC004808.1-201ENST00000627671 721 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AC009902.3-201ENST00000606235 2172 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLN6Q9NWW5 AC069528.2-201ENST00000624849 1991 ntBASIC2.14□□□□□ -2.07
CLN6Q9NWW5 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.14□□□□□ -2.07
CLN6Q9NWW5 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLN6Q9NWW5 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLN6Q9NWW5 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLN6Q9NWW5 RNU5E-10P-201ENST00000363506 118 ntBASIC2.14□□□□□ -2.07
CLN6Q9NWW5 RNU6-777P-201ENST00000364265 104 ntBASIC2.14□□□□□ -2.07
CLN6Q9NWW5 RNU1-52P-201ENST00000384190 164 ntBASIC2.14□□□□□ -2.07
CLN6Q9NWW5 ERHP2-201ENST00000402323 299 ntBASIC2.14□□□□□ -2.07
CLN6Q9NWW5 AL136310.1-201ENST00000404926 654 ntBASIC2.14□□□□□ -2.07
CLN6Q9NWW5 SEPT2P1-201ENST00000419651 180 ntBASIC2.14□□□□□ -2.07
CLN6Q9NWW5 MED14P1-201ENST00000430517 648 ntBASIC2.14□□□□□ -2.07
CLN6Q9NWW5 USP9YP10-201ENST00000454868 628 ntBASIC2.14□□□□□ -2.07
CLN6Q9NWW5 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.14□□□□□ -2.07
CLN6Q9NWW5 AC008481.1-201ENST00000463278 396 ntBASIC2.14□□□□□ -2.07
CLN6Q9NWW5 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.14□□□□□ -2.07
CLN6Q9NWW5 MTND5P13-201ENST00000513046 1079 ntBASIC2.14□□□□□ -2.07
CLN6Q9NWW5 AC022447.1-201ENST00000515358 464 ntBASIC2.14□□□□□ -2.07
CLN6Q9NWW5 RNU5F-8P-201ENST00000515941 111 ntBASIC2.14□□□□□ -2.07
CLN6Q9NWW5 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.14□□□□□ -2.07
CLN6Q9NWW5 AC060771.1-201ENST00000582031 164 ntBASIC2.14□□□□□ -2.07
CLN6Q9NWW5 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.14□□□□□ -2.07
CLN6Q9NWW5 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.14□□□□□ -2.07
CLN6Q9NWW5 AC012468.1-201ENST00000604888 430 ntBASIC2.14□□□□□ -2.07
CLN6Q9NWW5 AL137790.1-201ENST00000634283 177 ntBASIC2.14□□□□□ -2.07
CLN6Q9NWW5 AC010329.5-201ENST00000623497 2174 ntBASIC2.14□□□□□ -2.07
CLN6Q9NWW5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLN6Q9NWW5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CLN6Q9NWW5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLN6Q9NWW5 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLN6Q9NWW5 AL139276.1-201ENST00000311910 1001 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CLN6Q9NWW5 Y_RNA.245-201ENST00000364493 95 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 Y_RNA.465-201ENST00000384293 102 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CLN6Q9NWW5 MIR320C1-201ENST00000408566 88 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.13□□□□□ -2.07
CLN6Q9NWW5 AC096649.2-201ENST00000416186 393 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.13□□□□□ -2.07
CLN6Q9NWW5 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.13□□□□□ -2.07
CLN6Q9NWW5 ARL5AP4-201ENST00000430731 512 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.13□□□□□ -2.07
CLN6Q9NWW5 SNRPEP9-201ENST00000436794 238 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 AC107083.1-201ENST00000439643 279 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.13□□□□□ -2.07
CLN6Q9NWW5 OSTCP8-201ENST00000445117 448 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 RPL21P134-201ENST00000453468 483 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.13□□□□□ -2.07
CLN6Q9NWW5 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.13□□□□□ -2.07
CLN6Q9NWW5 AC104435.1-201ENST00000483483 166 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 LINC00888-204ENST00000487386 421 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 AC098591.2-201ENST00000510152 315 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 RN7SKP132-201ENST00000516001 208 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 RNA5SP320-201ENST00000516263 124 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 AC023538.1-201ENST00000534576 736 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.13□□□□□ -2.07
CLN6Q9NWW5 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.13□□□□□ -2.07
CLN6Q9NWW5 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.13□□□□□ -2.07
CLN6Q9NWW5 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.13□□□□□ -2.07
CLN6Q9NWW5 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.13□□□□□ -2.07
CLN6Q9NWW5 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.13□□□□□ -2.07
CLN6Q9NWW5 AL133445.2-201ENST00000611191 527 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 AC107075.1-201ENST00000613695 314 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 AL449363.1-201ENST00000617815 186 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 PCMTD1P7-201ENST00000634506 357 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 CU459211.1-201ENST00000635667 749 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 AC004520.1-201ENST00000608362 1413 ntBASIC2.13□□□□□ -2.07
CLN6Q9NWW5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.13□□□□□ -2.07
CLN6Q9NWW5 AC016717.2-201ENST00000609089 5141 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CLN6Q9NWW5 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLN6Q9NWW5 Y_RNA.192-201ENST00000363977 102 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 RN7SKP27-201ENST00000410684 333 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 NDUFS5P4-201ENST00000412983 318 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 MTATP6P20-201ENST00000414147 562 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 RPS3AP37-201ENST00000419176 745 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 BPY2DP-201ENST00000422208 265 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CLN6Q9NWW5 USP12PX-201ENST00000432383 1057 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 AC010153.1-201ENST00000432862 727 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.12□□□□□ -2.07
CLN6Q9NWW5 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
CLN6Q9NWW5 AL031659.1-201ENST00000447075 539 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.12□□□□□ -2.07
CLN6Q9NWW5 AC013267.1-201ENST00000458227 267 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.12□□□□□ -2.07
CLN6Q9NWW5 AC034222.1-201ENST00000494052 532 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 RPS27AP10-201ENST00000496103 208 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 AC116353.3-201ENST00000511215 249 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.12□□□□□ -2.07
CLN6Q9NWW5 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.12□□□□□ -2.07
CLN6Q9NWW5 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms