Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AL139397.2-201ENST00000404529 772 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 HSPE1P1-201ENST00000421494 318 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 AC006946.1-201ENST00000429106 328 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 AL592045.1-201ENST00000429867 352 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 TAAR7P-201ENST00000436141 242 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 AC104164.2-201ENST00000496953 495 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 AC104136.1-201ENST00000512969 394 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 RNU4-49P-201ENST00000516080 140 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 IGLVIV-65-201ENST00000517313 360 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 CYCSP29-201ENST00000533731 318 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 AP000763.2-201ENST00000540641 163 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 MIR4742-201ENST00000581069 85 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 MIR3941-201ENST00000582572 103 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 AC005498.1-201ENST00000592125 465 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 C8orf59P2-201ENST00000603441 271 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 AL161798.1-201ENST00000604630 131 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 AC245389.1-201ENST00000605141 529 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 AL713922.2-201ENST00000619384 716 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 AL512643.1-201ENST00000635735 524 ntBASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCM2LQ9NUG4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 AC010733.2-201ENST00000589496 5702 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 Y_RNA.11-201ENST00000362375 109 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 DEFB109C-201ENST00000382575 264 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 DEFB109B-201ENST00000382656 264 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 Y_RNA.414-201ENST00000384011 101 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 MIR301A-201ENST00000385261 86 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 RNA5SP219-201ENST00000390940 113 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 SNORA16.2-201ENST00000390991 127 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 EIF4E2P1-201ENST00000393781 255 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 PPIAP31-201ENST00000405422 495 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 AL356432.1-201ENST00000405809 419 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 BX682237.1-201ENST00000415016 335 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 AC007919.1-201ENST00000429380 217 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 PRPS1P1-201ENST00000445305 876 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 AC009237.8-201ENST00000445492 379 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 RN7SL303P-201ENST00000469773 251 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 TRBVA-201ENST00000498804 316 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 TTC39CP1-201ENST00000512513 755 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 RNU7-30P-201ENST00000516835 62 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 MIR5692A1-201ENST00000580523 69 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 AC020914.4-201ENST00000597690 277 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 IPO5P1-202ENST00000600039 287 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 AC021646.1-201ENST00000605469 484 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 Z82243.1-201ENST00000609432 473 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 AC103705.1-201ENST00000619013 241 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 AC005858.4-201ENST00000623191 700 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 AL359697.1-201ENST00000624879 587 ntBASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCM2LQ9NUG4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCM2LQ9NUG4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCM2LQ9NUG4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CCM2LQ9NUG4 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.03□□□□□ -1.76
CCM2LQ9NUG4 SNORD113-7-201ENST00000363762 77 ntBASIC4.03□□□□□ -1.76
CCM2LQ9NUG4 RNU6-512P-201ENST00000364438 103 ntBASIC4.03□□□□□ -1.76
CCM2LQ9NUG4 Y_RNA.245-201ENST00000364493 95 ntBASIC4.03□□□□□ -1.76
CCM2LQ9NUG4 Y_RNA.356-201ENST00000365475 113 ntBASIC4.03□□□□□ -1.76
CCM2LQ9NUG4 RNU6-1013P-201ENST00000384180 107 ntBASIC4.03□□□□□ -1.76
CCM2LQ9NUG4 MIR3065-201ENST00000390137 79 ntBASIC4.03□□□□□ -1.76
CCM2LQ9NUG4 RPS26P8-201ENST00000393490 348 ntBASIC4.03□□□□□ -1.76
CCM2LQ9NUG4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.03□□□□□ -1.76
CCM2LQ9NUG4 AL669831.1-202ENST00000428504 417 ntBASIC4.03□□□□□ -1.76
CCM2LQ9NUG4 AC011742.1-201ENST00000431448 434 ntBASIC4.03□□□□□ -1.76
CCM2LQ9NUG4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.03□□□□□ -1.76
CCM2LQ9NUG4 GTF2IP13-201ENST00000438487 386 ntBASIC4.03□□□□□ -1.76
CCM2LQ9NUG4 AL356535.1-201ENST00000440335 398 ntBASIC4.03□□□□□ -1.76
CCM2LQ9NUG4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.03□□□□□ -1.76
CCM2LQ9NUG4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms