Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL589655.1-201ENST00000405398 482 ntBASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 SUMO2P12-201ENST00000405924 140 ntBASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 RPS3AP24-201ENST00000407896 734 ntBASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 RPL31P63-201ENST00000422565 375 ntBASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 AL009174.1-201ENST00000426577 416 ntBASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 AC124916.1-201ENST00000444020 547 ntBASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 AC022447.1-201ENST00000515358 464 ntBASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 RNU6-798P-201ENST00000516912 103 ntBASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 AC084851.1-201ENST00000529105 249 ntBASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 AC118942.1-201ENST00000529674 1035 ntBASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 MTCO1P40-201ENST00000574371 625 ntBASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 BPTFP1-201ENST00000579209 492 ntBASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 GAS5-AS1-201ENST00000602767 694 ntBASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 AL589994.2-201ENST00000621124 579 ntBASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 RNU2-47P-201ENST00000410649 186 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 SEPT2P1-201ENST00000419651 180 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 AC099548.1-201ENST00000421443 426 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 HMGB1P9-201ENST00000429856 646 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 RPL23AP76-201ENST00000441860 458 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 MTCO3P2-201ENST00000457365 171 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 AC109471.1-201ENST00000511631 612 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 SNORA31.18-201ENST00000517043 134 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 MIR3609-201ENST00000582661 80 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 AC021749.1-201ENST00000604322 607 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 AC096586.1-201ENST00000610267 561 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 uc_338.5-201ENST00000611839 155 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 AP001486.3-201ENST00000615334 372 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 HMGB1P24-202ENST00000615653 685 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 AC006213.4-201ENST00000616184 634 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 AL356585.4-201ENST00000623078 1229 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 AC116618.1-201ENST00000634617 774 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 RNU6-543P-201ENST00000362576 108 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 MIR649-201ENST00000384843 97 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 AL513475.1-201ENST00000406602 315 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 AL512637.2-201ENST00000431287 1256 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 SNORD121B-201ENST00000458838 81 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 NDUFB4P2-201ENST00000509515 391 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 SNORD19.2-201ENST00000516978 73 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 ARL2BPP2-201ENST00000550907 489 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 ANP32BP3-201ENST00000559213 706 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 AC107214.2-201ENST00000608204 634 ntBASIC1.43□□□□□ -2.18
KIAA1549Q9HCM3 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 TMSB4XP8-201ENST00000402089 135 ntBASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 RNA5SP247-201ENST00000411181 105 ntBASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 TMSB4XP6-201ENST00000415187 135 ntBASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 PAICSP7-201ENST00000419829 962 ntBASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 TMSB4XP1-201ENST00000424567 135 ntBASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 AC090774.1-201ENST00000435925 246 ntBASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 TAAR7P-201ENST00000436141 242 ntBASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 SNRPFP4-201ENST00000456366 242 ntBASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 AC104685.1-201ENST00000502445 371 ntBASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 AC108729.3-201ENST00000513484 108 ntBASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 RNA5SP471-201ENST00000516971 106 ntBASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 RPS3AP4-201ENST00000555161 764 ntBASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 AC015720.1-201ENST00000565251 277 ntBASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 MIR4529-201ENST00000578110 78 ntBASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 OR4K8P-201ENST00000578842 1048 ntBASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 MIR4287-201ENST00000579398 78 ntBASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 AC012669.1-201ENST00000603209 283 ntBASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
KIAA1549Q9HCM3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AC092170.1-201ENST00000440211 356 ntBASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AL360221.1-201ENST00000445989 335 ntBASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 Z82190.1-201ENST00000454534 490 ntBASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AC147055.4-201ENST00000504399 745 ntBASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AC022483.1-201ENST00000514020 567 ntBASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 RNU6-202P-201ENST00000515998 96 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms