Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 RPS29P4-201ENST00000414733 161 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 BTF3L4P3-201ENST00000418879 476 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AL353678.1-201ENST00000422735 741 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 CYCSP46-201ENST00000423569 204 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 USP9YP36-201ENST00000424581 829 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AL353777.1-201ENST00000425552 326 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 PIGFP3-201ENST00000441918 722 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 USP9YP12-201ENST00000450481 570 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 SNRPGP6-201ENST00000451124 220 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AL031183.1-201ENST00000457667 207 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 RNU6-201P-201ENST00000517100 61 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 RPL23AP84-201ENST00000571193 464 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 MIR3118-1-201ENST00000581787 76 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 MIR4293-201ENST00000584305 78 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 KC877982.1-201ENST00000602313 470 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AC121247.2-201ENST00000604776 136 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AP000860.1-201ENST00000605250 559 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AC121334.2-201ENST00000605387 271 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AC239868.4-201ENST00000608318 671 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AC103710.1-201ENST00000610003 901 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AC104237.2-201ENST00000612456 443 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AC006338.1-201ENST00000618453 749 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 AC091953.2-201ENST00000623979 160 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 OR5H6-203ENST00000642105 978 ntBASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VIPAS39Q9H9C1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 RNU4-21P-201ENST00000362802 126 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 SNORA14A-201ENST00000364773 135 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 SNORA1.3-201ENST00000384676 136 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 PTMAP2-201ENST00000397627 327 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 RN7SKP220-201ENST00000410611 288 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 Y_RNA.608-201ENST00000410647 95 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 RPL17P12-201ENST00000413391 526 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 RPS15AP12-201ENST00000419498 388 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 AL451054.2-201ENST00000420896 202 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 AL590383.1-201ENST00000428602 75 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 FCF1P1-201ENST00000432690 571 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 AL512844.2-201ENST00000433990 593 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 CBWD4P-201ENST00000445695 655 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 SSXP1-201ENST00000453640 473 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 AC108059.3-201ENST00000456388 214 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 RN7SL542P-201ENST00000467147 294 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 AL135752.1-201ENST00000479477 471 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 SRIP1-201ENST00000489235 288 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 OR5BM1P-201ENST00000512021 366 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 RNA5SP402-201ENST00000517148 110 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 ZNF861P-201ENST00000588126 639 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 AL606834.2-201ENST00000602954 668 ntBASIC2.85□□□□□ -1.95
VIPAS39Q9H9C1 AC012360.2-201ENST00000609349 391 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms