Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 BMI1P1-201ENST00000445879 941 ntBASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 AC118282.2-201ENST00000508739 374 ntBASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 HMGN1P28-201ENST00000521340 364 ntBASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 DUXAP9-208ENST00000622815 614 ntBASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 Y_RNA.116-201ENST00000363292 103 ntBASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 RNU6-321P-201ENST00000410912 106 ntBASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 EIF1AXP1-201ENST00000419267 435 ntBASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 AL355994.1-201ENST00000424379 260 ntBASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 VN1R42P-201ENST00000424651 344 ntBASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 GTF2IP20-201ENST00000431663 360 ntBASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 RNU7-26P-201ENST00000458980 63 ntBASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 RPL21P47-201ENST00000483696 477 ntBASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 COX7A2P2-201ENST00000505291 250 ntBASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 OR5AQ1P-201ENST00000527596 927 ntBASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 AL590099.1-201ENST00000615276 138 ntBASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.27□□□□□ -2.05
UPF3BQ9BZI7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.26□□□□□ -2.05
UPF3BQ9BZI7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.26□□□□□ -2.05
UPF3BQ9BZI7 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.26□□□□□ -2.05
UPF3BQ9BZI7 AL512844.2-201ENST00000433990 593 ntBASIC2.26□□□□□ -2.05
UPF3BQ9BZI7 GTF2IP12-201ENST00000456547 356 ntBASIC2.26□□□□□ -2.05
UPF3BQ9BZI7 AL163540.1-201ENST00000485382 386 ntBASIC2.26□□□□□ -2.05
UPF3BQ9BZI7 AC022493.1-201ENST00000492984 337 ntBASIC2.26□□□□□ -2.05
UPF3BQ9BZI7 AC108078.2-201ENST00000510750 236 ntBASIC2.26□□□□□ -2.05
UPF3BQ9BZI7 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.26□□□□□ -2.05
UPF3BQ9BZI7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.26□□□□□ -2.05
UPF3BQ9BZI7 AC008127.2-201ENST00000549925 1075 ntBASIC2.26□□□□□ -2.05
UPF3BQ9BZI7 AC011611.5-201ENST00000552477 578 ntBASIC2.26□□□□□ -2.05
UPF3BQ9BZI7 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.26□□□□□ -2.05
UPF3BQ9BZI7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
UPF3BQ9BZI7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.26□□□□□ -2.05
UPF3BQ9BZI7 AC013553.2-201ENST00000604244 589 ntBASIC2.26□□□□□ -2.05
UPF3BQ9BZI7 AC103710.4-201ENST00000609301 899 ntBASIC2.26□□□□□ -2.05
UPF3BQ9BZI7 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.26□□□□□ -2.05
UPF3BQ9BZI7 CCT4P2-201ENST00000233836 1548 ntBASIC2.26□□□□□ -2.05
UPF3BQ9BZI7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
UPF3BQ9BZI7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 AL359851.1-201ENST00000569460 4997 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 AC016769.3-201ENST00000396562 315 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 SUMO2P12-201ENST00000405924 140 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 AL590084.1-201ENST00000407885 387 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 RNU6-920P-201ENST00000410926 92 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 LUZP4P1-201ENST00000415420 344 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 AC092047.1-201ENST00000424997 240 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 AC003989.2-201ENST00000440224 169 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 GPM6BP3-201ENST00000442797 145 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 PSPHP1-201ENST00000450062 261 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 AC092155.2-201ENST00000454675 477 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 snoU13.18-201ENST00000459483 104 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 SCARNA15.2-201ENST00000516409 127 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 AC022634.1-201ENST00000520765 532 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 AL049838.1-201ENST00000563647 981 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 APOOP1-201ENST00000604695 592 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 MIR8070-201ENST00000616510 88 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 AC244517.12-201ENST00000623581 663 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 AC012640.5-201ENST00000623897 319 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 MIR7515-201ENST00000637837 67 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.25□□□□□ -2.05
UPF3BQ9BZI7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms