Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AP004242.1-201ENST00000533701 349 ntBASIC5.18□□□□□ -1.58
CNTNAP3Q9BZ76 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.18□□□□□ -1.58
CNTNAP3Q9BZ76 AC104581.2-201ENST00000572227 430 ntBASIC5.18□□□□□ -1.58
CNTNAP3Q9BZ76 MIR5692A1-201ENST00000580523 69 ntBASIC5.18□□□□□ -1.58
CNTNAP3Q9BZ76 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.18□□□□□ -1.58
CNTNAP3Q9BZ76 AC067852.3-201ENST00000589177 561 ntBASIC5.18□□□□□ -1.58
CNTNAP3Q9BZ76 AC067852.4-201ENST00000590314 478 ntBASIC5.18□□□□□ -1.58
CNTNAP3Q9BZ76 AL133393.1-201ENST00000603277 287 ntBASIC5.18□□□□□ -1.58
CNTNAP3Q9BZ76 AC024220.1-201ENST00000603675 484 ntBASIC5.18□□□□□ -1.58
CNTNAP3Q9BZ76 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNTNAP3Q9BZ76 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CNTNAP3Q9BZ76 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNTNAP3Q9BZ76 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNTNAP3Q9BZ76 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNTNAP3Q9BZ76 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
CNTNAP3Q9BZ76 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.18□□□□□ -1.58
CNTNAP3Q9BZ76 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNTNAP3Q9BZ76 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CNTNAP3Q9BZ76 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 BTBD10P1-201ENST00000549824 1352 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 RNU6-1301P-201ENST00000362724 104 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 Y_RNA.357-201ENST00000365487 109 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 RNU6-147P-201ENST00000383983 107 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 RNU6-14P-201ENST00000384630 106 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 MIR521-1-201ENST00000384902 87 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 RNU4-30P-201ENST00000410245 143 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 AL512844.2-201ENST00000433990 593 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 KRT8P51-201ENST00000438938 274 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 RPL7L1P1-201ENST00000448259 785 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 AC079354.2-201ENST00000453523 154 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 RNU7-87P-201ENST00000459343 62 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 RPS4XP22-201ENST00000480755 780 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 AC091167.1-201ENST00000492017 396 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 HIGD1AP3-201ENST00000515857 278 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 RNU4ATAC15P-201ENST00000516415 126 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 Y_RNA.709-201ENST00000516952 92 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 MIR8076-201ENST00000611401 83 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 AC239868.2-201ENST00000564237 4527 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 AC135776.4-201ENST00000624300 1904 ntBASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.17□□□□□ -1.58
CNTNAP3Q9BZ76 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 U8.7-201ENST00000364940 136 ntBASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 Y_RNA.405-201ENST00000383979 100 ntBASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 Y_RNA.451-201ENST00000384200 100 ntBASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 RNU6-514P-201ENST00000384208 107 ntBASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 Y_RNA.524-201ENST00000384564 100 ntBASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 RNU6-178P-201ENST00000384631 104 ntBASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 Y_RNA.561-201ENST00000384694 100 ntBASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 RNA5SP89-201ENST00000410300 108 ntBASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 RNU6-1064P-201ENST00000410626 104 ntBASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 AC011742.1-201ENST00000431448 434 ntBASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 AC004938.1-201ENST00000438468 308 ntBASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 AC090602.1-201ENST00000469695 252 ntBASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 ANXA2P1-201ENST00000505539 926 ntBASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 RNA5SP464-201ENST00000516251 108 ntBASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 RNU6-659P-201ENST00000516454 104 ntBASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 AC090617.3-201ENST00000573670 475 ntBASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 AC091042.1-201ENST00000579213 173 ntBASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 MIR5582-201ENST00000579697 68 ntBASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 AC023043.4-201ENST00000612081 449 ntBASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.16□□□□□ -1.58
CNTNAP3Q9BZ76 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms