Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC005014.3-201ENST00000605985 190 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 AC004067.1-201ENST00000608733 700 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 AC090132.2-201ENST00000615881 347 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 AC008443.7-201ENST00000622195 246 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 AC091564.4-201ENST00000533934 2194 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 TPTE2P4-201ENST00000258589 1605 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 AC005336.3-201ENST00000623833 2679 ntBASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 ERHP2-201ENST00000402323 299 ntBASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 MTATP6P20-201ENST00000414147 562 ntBASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 PPP1R11P2-201ENST00000423543 382 ntBASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 USP9YP11-201ENST00000427537 717 ntBASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 OR4K11P-201ENST00000431829 904 ntBASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 MTND5P14-201ENST00000441481 1267 ntBASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 ZNF886P-201ENST00000450781 723 ntBASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 snoU109.3-201ENST00000459477 145 ntBASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 AC147055.4-201ENST00000504399 745 ntBASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 AC009901.1-201ENST00000506703 541 ntBASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 MTCYBP20-201ENST00000524239 1129 ntBASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 AC009977.1-201ENST00000586015 570 ntBASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 AC009831.4-201ENST00000620744 325 ntBASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.7□□□□□ -1.98
RPAP1Q9BWH6 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 RNA5SP99-201ENST00000364020 114 ntBASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 Y_RNA.311-201ENST00000365068 96 ntBASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 MIR122-201ENST00000385044 85 ntBASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 AL356320.2-201ENST00000417263 507 ntBASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 RPS3AP37-201ENST00000419176 745 ntBASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 AL356867.1-201ENST00000429623 299 ntBASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 ATP5F1P1-201ENST00000433775 569 ntBASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 AC009237.8-201ENST00000445492 379 ntBASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 AC079395.1-201ENST00000510981 262 ntBASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 RNU6-150P-201ENST00000516237 95 ntBASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 RNA5SP200-201ENST00000516360 103 ntBASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 RPPH1-2P-201ENST00000516688 293 ntBASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 RNA5SP82-201ENST00000516707 92 ntBASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 OR6C7P-201ENST00000547875 934 ntBASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 MYL12BP1-201ENST00000569826 507 ntBASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 AC109809.1-201ENST00000619665 545 ntBASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 AC110994.2-201ENST00000635481 492 ntBASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RPAP1Q9BWH6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 AC002543.1-201ENST00000299783 1954 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 AL161781.1-201ENST00000354277 403 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 RNU6-1180P-201ENST00000364935 107 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 SNORA48.3-201ENST00000391081 134 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 RPL23AP29-201ENST00000397284 453 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 NDUFB4P7-201ENST00000423198 363 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 BX119904.4-201ENST00000424402 301 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 EEF1A1P39-201ENST00000440791 250 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 MTND1P16-201ENST00000465177 898 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 AL049874.1-201ENST00000489560 388 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 GTF2IP9-201ENST00000502460 301 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 RNA5SP458-201ENST00000516188 119 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 Y_RNA.673-201ENST00000516306 88 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 AP000889.2-201ENST00000532684 490 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 CYCSP2-201ENST00000558168 301 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 MTCYBP23-201ENST00000558717 1102 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 AL353997.4-201ENST00000586196 166 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 AC013562.2-201ENST00000611632 603 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 AC002064.3-201ENST00000623448 346 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 MTND4P9-201ENST00000507819 1346 ntBASIC2.68□□□□□ -1.98
RPAP1Q9BWH6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 AC093536.2-201ENST00000565257 1406 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms