Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
BPIFA3Q9BQP9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
BPIFA3Q9BQP9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 MTND4P27-201ENST00000450813 1354 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 RNA5SP160-201ENST00000364866 120 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 RNU6-224P-201ENST00000384055 107 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 U3.26-201ENST00000391236 204 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 AL590084.2-201ENST00000401481 382 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 RNU6-516P-201ENST00000411381 104 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 AC096664.2-201ENST00000411843 406 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 Z75741.2-201ENST00000417272 1167 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 TIMM9P2-201ENST00000419324 266 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 AL451054.2-201ENST00000420896 202 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 ZYG11AP1-201ENST00000430329 837 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 RPL35AP22-201ENST00000436855 335 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 EEF1B2P7-201ENST00000451177 676 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 BX322784.1-201ENST00000455793 1077 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 RNU7-26P-201ENST00000458980 63 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 MRPL42P6-201ENST00000486397 371 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 AL160314.1-201ENST00000490836 438 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 SCARNA17.1-201ENST00000516211 143 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 SCARNA17.2-201ENST00000516334 143 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 BTF3P12-201ENST00000519620 469 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 AC025755.1-201ENST00000521306 278 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 AP003497.1-201ENST00000528472 562 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 AC234778.2-201ENST00000566241 354 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 SNORD53-201ENST00000579969 78 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 MIR4658-201ENST00000584344 65 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 SCARNA17.4-201ENST00000614296 143 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 HMGB1P24-202ENST00000615653 685 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 AC010133.1-201ENST00000615809 842 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 AC019226.1-201ENST00000625666 515 ntBASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
BPIFA3Q9BQP9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 RNU6-884P-201ENST00000363889 107 ntBASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 SNORA38-201ENST00000363946 132 ntBASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 RNU6-343P-201ENST00000364709 104 ntBASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 RNU1-52P-201ENST00000384190 164 ntBASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 RNU6-1207P-201ENST00000384343 107 ntBASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 TXNP7-201ENST00000406296 293 ntBASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 OR4K6P-201ENST00000416478 897 ntBASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 HMGB1P9-201ENST00000429856 646 ntBASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 AC079203.1-201ENST00000487972 404 ntBASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 AC105252.1-201ENST00000503089 286 ntBASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 AC113347.3-201ENST00000509113 148 ntBASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 LRRC6P1-201ENST00000532188 885 ntBASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 EIF4BP1-201ENST00000554881 351 ntBASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 AL359212.1-201ENST00000556608 614 ntBASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 OR4K7P-201ENST00000580232 945 ntBASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 AC021749.1-201ENST00000604322 607 ntBASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 AC093673.2-201ENST00000609674 331 ntBASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 AC009237.15-201ENST00000610252 501 ntBASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 AL138478.1-201ENST00000612252 832 ntBASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 AL390862.1-201ENST00000635467 1469 ntBASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
BPIFA3Q9BQP9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 RNU4-51P-201ENST00000364206 140 ntBASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 U3.12-201ENST00000364498 214 ntBASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 RNU6-1083P-201ENST00000384022 107 ntBASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 HMGN2P38-201ENST00000423806 265 ntBASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 MICF-203ENST00000432679 129 ntBASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 RPL12P25-201ENST00000455592 494 ntBASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 RPL23AP49-201ENST00000492925 468 ntBASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 RNA5SP281-201ENST00000516504 135 ntBASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 NACAP3-201ENST00000552100 481 ntBASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 AL132657.2-201ENST00000564417 358 ntBASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 AC135628.1-201ENST00000568867 534 ntBASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 AC009314.1-201ENST00000603871 304 ntBASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 MTND4LP5-201ENST00000605152 292 ntBASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 AC005000.2-201ENST00000605468 310 ntBASIC2.35□□□□□ -2.03
BPIFA3Q9BQP9 SDR42E1P2-201ENST00000614861 481 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms