Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 U2.17-201ENST00000611454 95 ntBASIC3.84□□□□□ -1.79
VRK1Q99986 MIR4727-201ENST00000622232 55 ntBASIC3.84□□□□□ -1.79
VRK1Q99986 TPTEP1-208ENST00000636884 213 ntBASIC3.84□□□□□ -1.79
VRK1Q99986 AC112487.2-201ENST00000637950 304 ntBASIC3.84□□□□□ -1.79
VRK1Q99986 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
VRK1Q99986 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VRK1Q99986 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VRK1Q99986 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VRK1Q99986 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.8
VRK1Q99986 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
VRK1Q99986 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
VRK1Q99986 MAPK10-373ENST00000641983 6772 ntBASIC3.84□□□□□ -1.8
VRK1Q99986 MAPK10-372ENST00000641954 3413 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VRK1Q99986 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.83□□□□□ -1.8
VRK1Q99986 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VRK1Q99986 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VRK1Q99986 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VRK1Q99986 RNU6-50P-201ENST00000362356 103 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 RNU6-741P-201ENST00000383889 107 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VRK1Q99986 RNU2-33P-201ENST00000410344 192 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.83□□□□□ -1.8
VRK1Q99986 NDUFB4P5-201ENST00000415445 361 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 TMSB10P2-201ENST00000416049 131 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.83□□□□□ -1.8
VRK1Q99986 MRPL50P4-201ENST00000446432 475 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.83□□□□□ -1.8
VRK1Q99986 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.83□□□□□ -1.8
VRK1Q99986 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.83□□□□□ -1.8
VRK1Q99986 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.83□□□□□ -1.8
VRK1Q99986 DYNLL1P5-201ENST00000467158 270 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 RN7SL303P-201ENST00000469773 251 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 RN7SL810P-201ENST00000493031 276 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.83□□□□□ -1.8
VRK1Q99986 AC103851.1-201ENST00000506833 274 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 SNORA19.2-201ENST00000516013 114 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 RNU6-864P-201ENST00000516256 108 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 SNORA31.9-201ENST00000516429 84 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 Y_RNA.691-201ENST00000516611 103 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 AC105029.1-201ENST00000520250 669 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 IGKV2D-19-201ENST00000523346 262 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.83□□□□□ -1.8
VRK1Q99986 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.83□□□□□ -1.8
VRK1Q99986 AC026464.5-201ENST00000562497 722 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 AC005668.1-201ENST00000571142 476 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.83□□□□□ -1.8
VRK1Q99986 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 AC243960.4-201ENST00000600532 288 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 AL590392.1-201ENST00000604960 446 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 AC106900.2-201ENST00000604994 317 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 CTHRC1P1-201ENST00000605383 469 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VRK1Q99986 AC007546.1-201ENST00000619452 559 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 AL445363.3-201ENST00000623080 671 ntBASIC3.83□□□□□ -1.8
VRK1Q99986 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.83□□□□□ -1.8
VRK1Q99986 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.83□□□□□ -1.8
VRK1Q99986 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.83□□□□□ -1.8
VRK1Q99986 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
VRK1Q99986 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
VRK1Q99986 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
VRK1Q99986 RNU6-512P-201ENST00000364438 103 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 RN7SKP227-201ENST00000364445 330 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 RNA5SP151-201ENST00000365632 117 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 AC068538.1-201ENST00000376856 336 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
VRK1Q99986 RNU6-1013P-201ENST00000384180 107 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 MIR301A-201ENST00000385261 86 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 AL583835.1-201ENST00000399570 407 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.82□□□□□ -1.8
VRK1Q99986 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.82□□□□□ -1.8
VRK1Q99986 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 RPS29P17-201ENST00000430795 166 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.82□□□□□ -1.8
VRK1Q99986 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.82□□□□□ -1.8
VRK1Q99986 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.82□□□□□ -1.8
VRK1Q99986 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.82□□□□□ -1.8
VRK1Q99986 HMGB1P18-201ENST00000438801 619 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 AC009237.8-201ENST00000445492 379 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.82□□□□□ -1.8
VRK1Q99986 AC010618.1-201ENST00000469924 477 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 RN7SKP122-201ENST00000515923 296 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 AP001804.3-201ENST00000525146 880 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 AP000827.1-201ENST00000527814 258 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.82□□□□□ -1.8
VRK1Q99986 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.82□□□□□ -1.8
VRK1Q99986 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.82□□□□□ -1.8
VRK1Q99986 SCOCP1-201ENST00000554676 349 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VRK1Q99986 MIR4644-201ENST00000579929 84 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 MIR5692A1-201ENST00000580523 69 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.82□□□□□ -1.8
VRK1Q99986 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.82□□□□□ -1.8
VRK1Q99986 AC023043.4-201ENST00000612081 449 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 AC114781.5-201ENST00000615297 108 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 AC022140.2-201ENST00000623500 188 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 AC022418.1-201ENST00000624118 445 ntBASIC3.82□□□□□ -1.8
VRK1Q99986 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.82□□□□□ -1.8
VRK1Q99986 OR52H1-202ENST00000641796 1061 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms