Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC110760.3-202ENST00000515177 371 ntBASIC2.55□□□□□ -2
NPAS2Q99743 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.55□□□□□ -2
NPAS2Q99743 RPPH1-2P-201ENST00000516688 293 ntBASIC2.55□□□□□ -2
NPAS2Q99743 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.55□□□□□ -2
NPAS2Q99743 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.55□□□□□ -2
NPAS2Q99743 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.55□□□□□ -2
NPAS2Q99743 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.55□□□□□ -2
NPAS2Q99743 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.55□□□□□ -2
NPAS2Q99743 AC007954.1-201ENST00000554198 494 ntBASIC2.55□□□□□ -2
NPAS2Q99743 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.55□□□□□ -2
NPAS2Q99743 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.55□□□□□ -2
NPAS2Q99743 TPMTP1-201ENST00000592307 737 ntBASIC2.55□□□□□ -2
NPAS2Q99743 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.55□□□□□ -2
NPAS2Q99743 NRBF2P5-201ENST00000603087 788 ntBASIC2.55□□□□□ -2
NPAS2Q99743 OR2AS2P-201ENST00000606902 342 ntBASIC2.55□□□□□ -2
NPAS2Q99743 AP000240.1-201ENST00000609910 452 ntBASIC2.55□□□□□ -2
NPAS2Q99743 AC034102.8-201ENST00000615146 484 ntBASIC2.55□□□□□ -2
NPAS2Q99743 AC006386.1-201ENST00000619436 415 ntBASIC2.55□□□□□ -2
NPAS2Q99743 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.55□□□□□ -2
NPAS2Q99743 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.54□□□□□ -2
NPAS2Q99743 RNU6-461P-201ENST00000364195 107 ntBASIC2.54□□□□□ -2
NPAS2Q99743 SNORA72.3-201ENST00000365074 132 ntBASIC2.54□□□□□ -2
NPAS2Q99743 AL356057.3-201ENST00000402607 340 ntBASIC2.54□□□□□ -2
NPAS2Q99743 RNA5SP21-201ENST00000410917 96 ntBASIC2.54□□□□□ -2
NPAS2Q99743 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.54□□□□□ -2
NPAS2Q99743 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.54□□□□□ -2
NPAS2Q99743 AC019097.1-201ENST00000424783 735 ntBASIC2.54□□□□□ -2
NPAS2Q99743 AC063976.3-201ENST00000426849 329 ntBASIC2.54□□□□□ -2
NPAS2Q99743 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.54□□□□□ -2
NPAS2Q99743 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.54□□□□□ -2
NPAS2Q99743 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.54□□□□□ -2
NPAS2Q99743 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.54□□□□□ -2
NPAS2Q99743 MTCO1P27-201ENST00000448269 226 ntBASIC2.54□□□□□ -2
NPAS2Q99743 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.54□□□□□ -2
NPAS2Q99743 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.54□□□□□ -2
NPAS2Q99743 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.54□□□□□ -2
NPAS2Q99743 AL160314.1-201ENST00000490836 438 ntBASIC2.54□□□□□ -2
NPAS2Q99743 AC034222.1-201ENST00000494052 532 ntBASIC2.54□□□□□ -2
NPAS2Q99743 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.54□□□□□ -2
NPAS2Q99743 AC117522.3-201ENST00000507974 584 ntBASIC2.54□□□□□ -2
NPAS2Q99743 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.54□□□□□ -2
NPAS2Q99743 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.54□□□□□ -2
NPAS2Q99743 AC023538.1-201ENST00000534576 736 ntBASIC2.54□□□□□ -2
NPAS2Q99743 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.54□□□□□ -2
NPAS2Q99743 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.54□□□□□ -2
NPAS2Q99743 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.54□□□□□ -2
NPAS2Q99743 AGGF1P5-201ENST00000567900 919 ntBASIC2.54□□□□□ -2
NPAS2Q99743 AC090616.3-201ENST00000582184 217 ntBASIC2.54□□□□□ -2
NPAS2Q99743 AL596327.1-201ENST00000603629 213 ntBASIC2.54□□□□□ -2
NPAS2Q99743 AL357094.1-201ENST00000603845 844 ntBASIC2.54□□□□□ -2
NPAS2Q99743 AC010297.1-201ENST00000623948 149 ntBASIC2.54□□□□□ -2
NPAS2Q99743 PCMTD1P7-201ENST00000634506 357 ntBASIC2.54□□□□□ -2
NPAS2Q99743 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.54□□□□□ -2
NPAS2Q99743 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
NPAS2Q99743 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
NPAS2Q99743 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.53□□□□□ -2
NPAS2Q99743 AC135776.4-201ENST00000624300 1904 ntBASIC2.53□□□□□ -2
NPAS2Q99743 MIR449A-201ENST00000362113 91 ntBASIC2.53□□□□□ -2
NPAS2Q99743 RNU4-92P-201ENST00000363783 136 ntBASIC2.53□□□□□ -2
NPAS2Q99743 RNU6-777P-201ENST00000364265 104 ntBASIC2.53□□□□□ -2
NPAS2Q99743 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
NPAS2Q99743 RNU6-636P-201ENST00000384598 107 ntBASIC2.53□□□□□ -2
NPAS2Q99743 MIR34A-201ENST00000385130 110 ntBASIC2.53□□□□□ -2
NPAS2Q99743 MIR9-1-201ENST00000385198 89 ntBASIC2.53□□□□□ -2
NPAS2Q99743 RNA5SP181-201ENST00000410246 98 ntBASIC2.53□□□□□ -2
NPAS2Q99743 SSR1P2-201ENST00000415208 787 ntBASIC2.53□□□□□ -2
NPAS2Q99743 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.53□□□□□ -2
NPAS2Q99743 AC083875.1-201ENST00000419509 405 ntBASIC2.53□□□□□ -2
NPAS2Q99743 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.53□□□□□ -2
NPAS2Q99743 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.53□□□□□ -2
NPAS2Q99743 PTENP1-201ENST00000447117 1215 ntBASIC2.53□□□□□ -2
NPAS2Q99743 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.53□□□□□ -2
NPAS2Q99743 RPL26P9-201ENST00000457466 433 ntBASIC2.53□□□□□ -2
NPAS2Q99743 USP9YP25-201ENST00000457708 443 ntBASIC2.53□□□□□ -2
NPAS2Q99743 AC013267.1-201ENST00000458227 267 ntBASIC2.53□□□□□ -2
NPAS2Q99743 AC107626.1-201ENST00000471084 183 ntBASIC2.53□□□□□ -2
NPAS2Q99743 RN7SL429P-201ENST00000479090 223 ntBASIC2.53□□□□□ -2
NPAS2Q99743 RN7SL432P-201ENST00000484057 298 ntBASIC2.53□□□□□ -2
NPAS2Q99743 RN7SL489P-201ENST00000486185 223 ntBASIC2.53□□□□□ -2
NPAS2Q99743 RN7SL327P-201ENST00000488659 223 ntBASIC2.53□□□□□ -2
NPAS2Q99743 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.53□□□□□ -2
NPAS2Q99743 AC010587.2-201ENST00000511727 448 ntBASIC2.53□□□□□ -2
NPAS2Q99743 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.53□□□□□ -2
NPAS2Q99743 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.53□□□□□ -2
NPAS2Q99743 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.53□□□□□ -2
NPAS2Q99743 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.53□□□□□ -2
NPAS2Q99743 UBE2L4-201ENST00000587688 464 ntBASIC2.53□□□□□ -2
NPAS2Q99743 AF038458.1-201ENST00000588406 262 ntBASIC2.53□□□□□ -2
NPAS2Q99743 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.53□□□□□ -2
NPAS2Q99743 RN7SL853P-201ENST00000617250 223 ntBASIC2.53□□□□□ -2
NPAS2Q99743 AL158801.5-201ENST00000623123 465 ntBASIC2.53□□□□□ -2
NPAS2Q99743 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
NPAS2Q99743 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NPAS2Q99743 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.53□□□□□ -2
NPAS2Q99743 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
NPAS2Q99743 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
NPAS2Q99743 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
NPAS2Q99743 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.52□□□□□ -2.01
NPAS2Q99743 AC004944.1-201ENST00000517807 3059 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms