Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RN7SKP82-201ENST00000516786 223 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 MTCO3P23-201ENST00000561363 289 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 MIR4703-201ENST00000577728 79 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 AC138761.3-201ENST00000579993 334 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 AC104695.3-201ENST00000604052 296 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 MIR432-201ENST00000606207 94 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 uc_338.12-201ENST00000616344 181 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 AL161781.1-201ENST00000354277 403 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 RNU6-209P-201ENST00000384118 107 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 MIR558-201ENST00000384920 94 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 RNU6-954P-201ENST00000411355 107 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 AL451050.1-201ENST00000450126 415 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 AC079804.1-201ENST00000461922 436 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 AC126389.1-201ENST00000477436 290 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 Y_RNA.680-201ENST00000516441 93 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 AC090136.1-201ENST00000520009 240 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 AP000857.1-201ENST00000532151 543 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 AC024224.1-201ENST00000538284 609 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 AC113195.1-201ENST00000579952 141 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 MIR4286-201ENST00000580651 93 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 AC067852.4-201ENST00000590314 478 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 VN1R85P-201ENST00000601587 426 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 AC068790.3-201ENST00000602988 553 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 AC130324.3-201ENST00000614165 542 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 U2.1-201ENST00000618978 145 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 CR392039.4-201ENST00000624968 501 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 KPNA2P1-201ENST00000458289 1591 ntBASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDK5RAP1Q96SZ6 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 RLIMP1-201ENST00000339626 1680 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AL139276.1-201ENST00000311910 1001 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 XIAPP3-201ENST00000312918 795 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 HSPE1P11-201ENST00000339579 310 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 Y_RNA.80-201ENST00000362996 102 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 DEFB109C-201ENST00000382575 264 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 DEFB109B-201ENST00000382656 264 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 Y_RNA.396-201ENST00000383949 103 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 RNU6-641P-201ENST00000384006 107 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 Y_RNA.485-201ENST00000384395 102 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 MIR649-201ENST00000384843 97 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 RPL21P65-201ENST00000406094 466 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 RPL31P45-201ENST00000419532 356 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AL117339.2-201ENST00000430475 180 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 RPL21P89-201ENST00000444021 467 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AL162151.2-201ENST00000448875 158 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 RNU7-182P-201ENST00000459009 62 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AC128713.1-201ENST00000471495 306 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AC110792.1-201ENST00000491826 472 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms