Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 SNORD65-201ENST00000391079 73 ntBASIC1.84□□□□□ -2.11
IFT140Q96RY7 RNA5SP465-201ENST00000391195 109 ntBASIC1.84□□□□□ -2.11
IFT140Q96RY7 AP002784.2-201ENST00000397300 549 ntBASIC1.84□□□□□ -2.11
IFT140Q96RY7 TXNP7-201ENST00000406296 293 ntBASIC1.84□□□□□ -2.11
IFT140Q96RY7 RNU2-21P-201ENST00000410368 188 ntBASIC1.84□□□□□ -2.11
IFT140Q96RY7 AL356379.1-201ENST00000414105 126 ntBASIC1.84□□□□□ -2.11
IFT140Q96RY7 CYCSP33-201ENST00000414485 327 ntBASIC1.84□□□□□ -2.11
IFT140Q96RY7 NUP35P2-201ENST00000416748 943 ntBASIC1.84□□□□□ -2.11
IFT140Q96RY7 EBAG9P1-201ENST00000418955 543 ntBASIC1.84□□□□□ -2.11
IFT140Q96RY7 RNA5SP233-201ENST00000459153 113 ntBASIC1.84□□□□□ -2.11
IFT140Q96RY7 RNU6-1132P-201ENST00000459214 107 ntBASIC1.84□□□□□ -2.11
IFT140Q96RY7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.84□□□□□ -2.11
IFT140Q96RY7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.84□□□□□ -2.11
IFT140Q96RY7 AC111000.5-201ENST00000506559 1178 ntBASIC1.84□□□□□ -2.11
IFT140Q96RY7 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.84□□□□□ -2.11
IFT140Q96RY7 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.84□□□□□ -2.11
IFT140Q96RY7 AC243773.3-201ENST00000613270 256 ntBASIC1.84□□□□□ -2.11
IFT140Q96RY7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
IFT140Q96RY7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.84□□□□□ -2.11
IFT140Q96RY7 AC080100.1-201ENST00000624239 5356 ntBASIC1.84□□□□□ -2.12
IFT140Q96RY7 AL442644.1-201ENST00000454390 3105 ntBASIC1.83□□□□□ -2.12
IFT140Q96RY7 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
IFT140Q96RY7 AL512504.1-201ENST00000415494 778 ntBASIC1.83□□□□□ -2.12
IFT140Q96RY7 VN1R108P-201ENST00000431580 830 ntBASIC1.83□□□□□ -2.12
IFT140Q96RY7 RPS24P6-201ENST00000452670 400 ntBASIC1.83□□□□□ -2.12
IFT140Q96RY7 RPL7P18-201ENST00000478965 734 ntBASIC1.83□□□□□ -2.12
IFT140Q96RY7 RPS23P4-201ENST00000487908 423 ntBASIC1.83□□□□□ -2.12
IFT140Q96RY7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
IFT140Q96RY7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.83□□□□□ -2.12
IFT140Q96RY7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
IFT140Q96RY7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
IFT140Q96RY7 HSPE1P4-201ENST00000550617 308 ntBASIC1.83□□□□□ -2.12
IFT140Q96RY7 AC123912.5-201ENST00000605470 343 ntBASIC1.83□□□□□ -2.12
IFT140Q96RY7 MTND5P10-201ENST00000603719 1809 ntBASIC1.83□□□□□ -2.12
IFT140Q96RY7 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
IFT140Q96RY7 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.82□□□□□ -2.12
IFT140Q96RY7 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
IFT140Q96RY7 RNU6-244P-201ENST00000391028 104 ntBASIC1.82□□□□□ -2.12
IFT140Q96RY7 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.82□□□□□ -2.12
IFT140Q96RY7 RPL30P12-201ENST00000474666 353 ntBASIC1.82□□□□□ -2.12
IFT140Q96RY7 AL135752.1-201ENST00000479477 471 ntBASIC1.82□□□□□ -2.12
IFT140Q96RY7 AC092902.1-201ENST00000486999 259 ntBASIC1.82□□□□□ -2.12
IFT140Q96RY7 AC104685.1-201ENST00000502445 371 ntBASIC1.82□□□□□ -2.12
IFT140Q96RY7 ERHP1-201ENST00000523006 310 ntBASIC1.82□□□□□ -2.12
IFT140Q96RY7 AC090821.2-201ENST00000523552 176 ntBASIC1.82□□□□□ -2.12
IFT140Q96RY7 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.82□□□□□ -2.12
IFT140Q96RY7 MTCO2P22-201ENST00000603246 681 ntBASIC1.82□□□□□ -2.12
IFT140Q96RY7 AC135178.6-201ENST00000605314 398 ntBASIC1.82□□□□□ -2.12
IFT140Q96RY7 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
IFT140Q96RY7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.82□□□□□ -2.12
IFT140Q96RY7 MIR17-201ENST00000385012 84 ntBASIC1.82□□□□□ -2.12
IFT140Q96RY7 MTCYBP24-201ENST00000420387 1106 ntBASIC1.82□□□□□ -2.12
IFT140Q96RY7 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.82□□□□□ -2.12
IFT140Q96RY7 RPL31P20-201ENST00000449593 360 ntBASIC1.82□□□□□ -2.12
IFT140Q96RY7 AL031183.1-201ENST00000457667 207 ntBASIC1.82□□□□□ -2.12
IFT140Q96RY7 AC021087.2-201ENST00000504656 1203 ntBASIC1.82□□□□□ -2.12
IFT140Q96RY7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.82□□□□□ -2.12
IFT140Q96RY7 CASP1P1-201ENST00000526345 212 ntBASIC1.82□□□□□ -2.12
IFT140Q96RY7 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
IFT140Q96RY7 NUTF2P8-201ENST00000604593 363 ntBASIC1.82□□□□□ -2.12
IFT140Q96RY7 AC006338.1-201ENST00000618453 749 ntBASIC1.82□□□□□ -2.12
IFT140Q96RY7 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.82□□□□□ -2.12
IFT140Q96RY7 Y_RNA.62-201ENST00000362840 99 ntBASIC1.81□□□□□ -2.12
IFT140Q96RY7 SNORD56-201ENST00000413522 71 ntBASIC1.81□□□□□ -2.12
IFT140Q96RY7 AL606495.1-201ENST00000422100 813 ntBASIC1.81□□□□□ -2.12
IFT140Q96RY7 UBE2D3P2-201ENST00000424409 445 ntBASIC1.81□□□□□ -2.12
IFT140Q96RY7 AC010285.1-201ENST00000470580 392 ntBASIC1.81□□□□□ -2.12
IFT140Q96RY7 SYPL1P1-201ENST00000473622 768 ntBASIC1.81□□□□□ -2.12
IFT140Q96RY7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.81□□□□□ -2.12
IFT140Q96RY7 COX6CP3-201ENST00000580869 223 ntBASIC1.81□□□□□ -2.12
IFT140Q96RY7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.81□□□□□ -2.12
IFT140Q96RY7 AL020996.3-201ENST00000606617 222 ntBASIC1.81□□□□□ -2.12
IFT140Q96RY7 AC006963.1-201ENST00000624003 1052 ntBASIC1.81□□□□□ -2.12
IFT140Q96RY7 AC020923.1-201ENST00000624021 917 ntBASIC1.81□□□□□ -2.12
IFT140Q96RY7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.8□□□□□ -2.12
IFT140Q96RY7 RNA5SP457-201ENST00000363657 124 ntBASIC1.8□□□□□ -2.12
IFT140Q96RY7 RPS20P15-201ENST00000412792 311 ntBASIC1.8□□□□□ -2.12
IFT140Q96RY7 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.8□□□□□ -2.12
IFT140Q96RY7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.8□□□□□ -2.12
IFT140Q96RY7 AC105252.1-201ENST00000503089 286 ntBASIC1.8□□□□□ -2.12
IFT140Q96RY7 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.8□□□□□ -2.12
IFT140Q96RY7 IMMP1LP2-201ENST00000552954 492 ntBASIC1.8□□□□□ -2.12
IFT140Q96RY7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.8□□□□□ -2.12
IFT140Q96RY7 AC008749.1-201ENST00000597650 306 ntBASIC1.8□□□□□ -2.12
IFT140Q96RY7 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.8□□□□□ -2.12
IFT140Q96RY7 AL390862.1-201ENST00000635467 1469 ntBASIC1.79□□□□□ -2.12
IFT140Q96RY7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
IFT140Q96RY7 MIR532-201ENST00000385025 91 ntBASIC1.79□□□□□ -2.12
IFT140Q96RY7 PGBD4P6-201ENST00000421501 610 ntBASIC1.79□□□□□ -2.12
IFT140Q96RY7 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.79□□□□□ -2.12
IFT140Q96RY7 AC004062.1-201ENST00000509926 645 ntBASIC1.79□□□□□ -2.12
IFT140Q96RY7 OR5BM1P-201ENST00000512021 366 ntBASIC1.79□□□□□ -2.12
IFT140Q96RY7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.79□□□□□ -2.12
IFT140Q96RY7 AC233266.2-201ENST00000567067 528 ntBASIC1.79□□□□□ -2.12
IFT140Q96RY7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.79□□□□□ -2.12
IFT140Q96RY7 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.79□□□□□ -2.12
IFT140Q96RY7 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
IFT140Q96RY7 RNU6-1072P-201ENST00000384703 107 ntBASIC1.78□□□□□ -2.12
IFT140Q96RY7 RNU6-443P-201ENST00000384780 107 ntBASIC1.78□□□□□ -2.12
IFT140Q96RY7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms