Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 Z82243.1-201ENST00000609432 473 ntBASIC4.63□□□□□ -1.67
CHAMP1Q96JM3 AL359757.2-201ENST00000624309 274 ntBASIC4.63□□□□□ -1.67
CHAMP1Q96JM3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.63□□□□□ -1.67
CHAMP1Q96JM3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.63□□□□□ -1.67
CHAMP1Q96JM3 MTCO1P24-201ENST00000515438 1558 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 TPTE2P4-201ENST00000258589 1605 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 RNU6-1155P-201ENST00000363554 107 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 RNA5SP399-201ENST00000364003 117 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 MIR491-201ENST00000384877 84 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 RNU6-550P-201ENST00000391057 101 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 GOT2P5-201ENST00000433995 546 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 AC007389.2-201ENST00000434630 306 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 MTCO3P45-201ENST00000443036 613 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 AL590399.6-201ENST00000446396 307 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 NIPA2P5-201ENST00000452282 464 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 RNA5SP246-201ENST00000458909 119 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 VN1R17P-201ENST00000472048 1090 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 AC010631.1-201ENST00000474150 156 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 RPL7P43-201ENST00000478876 753 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 MTND5P5-201ENST00000503764 376 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 RBBP4P6-201ENST00000508098 202 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 AC099522.1-202ENST00000514718 367 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 RNU6-1095P-201ENST00000516148 108 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 Y_RNA.682-201ENST00000516457 100 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 RNU6-685P-201ENST00000517088 95 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 SNORA70.24-201ENST00000517233 118 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 AC090136.1-201ENST00000520009 240 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 AC103783.1-201ENST00000520506 373 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 HMGN1P28-201ENST00000521340 364 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 AP000889.2-201ENST00000532684 490 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 MIR4286-201ENST00000580651 93 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 RN7SL600P-201ENST00000581811 299 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 AC020914.4-201ENST00000597690 277 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 MIR486-1-201ENST00000612171 68 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 AC243312.2-201ENST00000623340 601 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 GABPAP-201ENST00000419271 1356 ntBASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.62□□□□□ -1.67
CHAMP1Q96JM3 AC073073.2-201ENST00000609827 2578 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 RNU6-946P-201ENST00000383878 107 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 MIR1250-201ENST00000408098 113 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 RNU4-46P-201ENST00000410818 138 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 RNU4-78P-201ENST00000410940 126 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 RNU6-387P-201ENST00000411331 105 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 RPL30P2-201ENST00000414021 291 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 RAC1P6-201ENST00000423911 575 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 RPL21P112-201ENST00000434403 463 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 RNU7-152P-201ENST00000458982 64 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 AC008481.1-201ENST00000463278 396 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 RN7SL432P-201ENST00000484057 298 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 AC005741.1-201ENST00000511094 432 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 RNU6-559P-201ENST00000516151 98 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 SNORA74D-201ENST00000516404 141 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 ELOCP31-201ENST00000540463 467 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 AC107016.1-201ENST00000550463 337 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 MIR3171-201ENST00000584270 74 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 SNRPGP17-201ENST00000603780 214 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 APOOP1-201ENST00000604695 592 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 AL034351.1-201ENST00000605288 668 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 AL627309.6-201ENST00000606857 840 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 AL133215.3-201ENST00000609801 448 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 AL023881.1-201ENST00000621088 301 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 AC090971.5-201ENST00000621102 293 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 MTND4LP32-201ENST00000636111 270 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 UBE3AP2-201ENST00000429033 2259 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 AP001350.1-201ENST00000601906 1524 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 AC090229.1-201ENST00000590983 1609 ntBASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHAMP1Q96JM3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 AL137003.2-201ENST00000606924 2538 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 RNU6-1287P-201ENST00000362914 107 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms