Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 IGKV1-32-201ENST00000519290 311 ntBASIC5.58□□□□□ -1.52
HLA-CQ95604 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-CQ95604 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-CQ95604 MIR5692C2-201ENST00000577959 77 ntBASIC5.58□□□□□ -1.52
HLA-CQ95604 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.58□□□□□ -1.52
HLA-CQ95604 AC090617.7-201ENST00000623952 126 ntBASIC5.58□□□□□ -1.52
HLA-CQ95604 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-CQ95604 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-CQ95604 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-CQ95604 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-CQ95604 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-CQ95604 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-CQ95604 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-CQ95604 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HLA-CQ95604 AC018529.3-201ENST00000624212 2254 ntBASIC5.58□□□□□ -1.52
HLA-CQ95604 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-CQ95604 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-CQ95604 AC144833.1-201ENST00000567953 4089 ntBASIC5.58□□□□□ -1.52
HLA-CQ95604 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-CQ95604 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-CQ95604 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-CQ95604 MAPK10-263ENST00000641052 4307 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.57□□□□□ -1.52
HLA-CQ95604 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-CQ95604 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-CQ95604 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HLA-CQ95604 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-CQ95604 Z95114.1-201ENST00000624264 14574 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 AL353743.1-202ENST00000431724 1695 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-CQ95604 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HLA-CQ95604 RNU6-137P-201ENST00000363680 108 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 Y_RNA.272-201ENST00000364696 102 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 RNU6-926P-201ENST00000384075 107 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 Y_RNA.497-201ENST00000384447 98 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 MIR1193-201ENST00000408109 78 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 RNU4-30P-201ENST00000410245 143 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-CQ95604 RAB9AP3-201ENST00000412737 573 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 AC015977.1-201ENST00000418887 292 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.57□□□□□ -1.52
HLA-CQ95604 TMEM183AP1-205ENST00000432739 290 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-CQ95604 RAB9AP1-201ENST00000449393 573 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 AP001025.1-201ENST00000486139 332 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 AL049874.1-201ENST00000489560 388 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.57□□□□□ -1.52
HLA-CQ95604 RN7SKP272-201ENST00000516988 232 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 SNORA31.19-201ENST00000517079 126 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 HMGB1P14-201ENST00000557424 591 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-CQ95604 MIR3921-201ENST00000577308 85 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 AL590392.1-201ENST00000604960 446 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 AP001005.3-201ENST00000622049 129 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-CQ95604 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-CQ95604 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HLA-CQ95604 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-CQ95604 OR4G2P-202ENST00000641004 1759 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
HLA-CQ95604 AL139811.1-201ENST00000424779 2299 ntBASIC5.57□□□□□ -1.52
HLA-CQ95604 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-CQ95604 AL731532.1-201ENST00000623972 4236 ntBASIC5.56□□□□□ -1.52
HLA-CQ95604 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
HLA-CQ95604 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-CQ95604 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-CQ95604 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-CQ95604 STX3-208ENST00000641815 3236 ntBASIC5.56□□□□□ -1.52
HLA-CQ95604 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-CQ95604 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-CQ95604 RBBP8P1-201ENST00000449447 1844 ntBASIC5.56□□□□□ -1.52
HLA-CQ95604 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
HLA-CQ95604 RNA5SP197-201ENST00000363357 119 ntBASIC5.56□□□□□ -1.52
HLA-CQ95604 RNU6-923P-201ENST00000364753 107 ntBASIC5.56□□□□□ -1.52
HLA-CQ95604 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-CQ95604 RNU6-1286P-201ENST00000383871 107 ntBASIC5.56□□□□□ -1.52
HLA-CQ95604 SNORA70.9-201ENST00000384370 135 ntBASIC5.56□□□□□ -1.52
HLA-CQ95604 SNORA40.19-201ENST00000390846 128 ntBASIC5.56□□□□□ -1.52
HLA-CQ95604 Z85995.1-201ENST00000415547 335 ntBASIC5.56□□□□□ -1.52
HLA-CQ95604 AC112498.1-201ENST00000444401 332 ntBASIC5.56□□□□□ -1.52
HLA-CQ95604 AL078601.1-201ENST00000444542 271 ntBASIC5.56□□□□□ -1.52
HLA-CQ95604 AC096638.1-201ENST00000444678 216 ntBASIC5.56□□□□□ -1.52
HLA-CQ95604 AC006026.2-201ENST00000457376 180 ntBASIC5.56□□□□□ -1.52
HLA-CQ95604 RPL26P26-201ENST00000480251 434 ntBASIC5.56□□□□□ -1.52
HLA-CQ95604 AC016256.1-201ENST00000547971 354 ntBASIC5.56□□□□□ -1.52
HLA-CQ95604 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-CQ95604 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-CQ95604 MIR4308-201ENST00000580634 81 ntBASIC5.56□□□□□ -1.52
HLA-CQ95604 MIR3667-201ENST00000581025 74 ntBASIC5.56□□□□□ -1.52
HLA-CQ95604 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-CQ95604 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.56□□□□□ -1.52
HLA-CQ95604 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
HLA-CQ95604 AC009541.1-201ENST00000438279 2662 ntBASIC5.56□□□□□ -1.52
HLA-CQ95604 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-CQ95604 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-CQ95604 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-CQ95604 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-CQ95604 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-CQ95604 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-CQ95604 AC083843.3-201ENST00000623679 2186 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms