Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RNA5SP490-201ENST00000517141 136 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 RNU4-60P-201ENST00000517239 135 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 MIR4637-201ENST00000582405 84 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 AC015688.2-201ENST00000584523 262 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 AL133393.1-201ENST00000603277 287 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 AC009314.1-201ENST00000603871 304 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 AL359821.1-201ENST00000605519 182 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 AC013562.2-201ENST00000611632 603 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 DUXAP10-204ENST00000612052 616 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 MIR6132-201ENST00000622083 109 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 ZNF355P-201ENST00000427301 3216 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 SUGT1P1-201ENST00000379514 476 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AP1B1P2-201ENST00000416196 106 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AL593851.1-201ENST00000426171 157 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 GTF2IP7-202ENST00000436677 309 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 FGF7P5-201ENST00000441829 291 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 MTCYBP11-201ENST00000447254 1109 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AC079804.2-201ENST00000490376 200 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AC006390.1-201ENST00000508068 283 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 SULT1C2P1-202ENST00000562418 459 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AL391001.1-201ENST00000602747 715 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AL356280.1-201ENST00000603614 379 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 SNRPGP19-201ENST00000603826 189 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AC107952.2-201ENST00000606048 486 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AC092106.3-201ENST00000611308 722 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 MTND4P35-201ENST00000604257 1375 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 MIR649-201ENST00000384843 97 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 RNU6-821P-201ENST00000390995 107 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AC109780.2-201ENST00000413467 845 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 BTF3P4-201ENST00000418852 495 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 MTND4P6-201ENST00000438297 472 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AL354941.1-201ENST00000438600 464 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 MTCO2P25-201ENST00000447065 681 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 MTCYBP17-201ENST00000503579 789 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 MTCO3P44-201ENST00000510977 541 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AC109445.1-201ENST00000512356 383 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AC239860.2-201ENST00000525886 270 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 DEFB131D-201ENST00000526803 184 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 MTND2P26-201ENST00000528255 1029 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 CR383656.7-201ENST00000548164 174 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 RPS3AP23-202ENST00000574601 686 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AP001180.3-201ENST00000582221 145 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 SNORA4-201ENST00000584302 138 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 OR4G1P-201ENST00000588632 938 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AC245036.5-201ENST00000596330 847 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AC006270.3-201ENST00000605967 1036 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AL589994.2-201ENST00000621124 579 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AL078595.3-201ENST00000623815 1166 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AC120349.2-201ENST00000625002 298 ntBASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.03□□□□□ -2.08
SHROOM3Q8TF72 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 AC103988.1-201ENST00000566382 2177 ntBASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 SNORD51-201ENST00000384320 80 ntBASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 SNORA67.5-201ENST00000391036 107 ntBASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 RNU1-101P-201ENST00000391171 127 ntBASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 RNU2-68P-201ENST00000410878 191 ntBASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 RNU6-575P-201ENST00000411326 105 ntBASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 MTND2P19-201ENST00000449129 1012 ntBASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 AC026410.2-201ENST00000460281 156 ntBASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 MTCYBP37-201ENST00000510642 1133 ntBASIC2.02□□□□□ -2.09
SHROOM3Q8TF72 AC092436.3-201ENST00000511788 257 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms