Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 RNU6-511P-201ENST00000363496 107 ntBASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 RNU4-1-201ENST00000363925 141 ntBASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 AL139397.2-201ENST00000404529 772 ntBASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 AL021407.1-201ENST00000404531 386 ntBASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 AC019097.1-201ENST00000424783 735 ntBASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 RPS27P27-201ENST00000498779 255 ntBASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 AC114797.1-201ENST00000514003 728 ntBASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 AC119751.5-201ENST00000514077 770 ntBASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 SNORA31.3-201ENST00000516029 96 ntBASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 SNORA31.15-201ENST00000516771 132 ntBASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 RNA5SP291-201ENST00000517222 105 ntBASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 MTCO1P47-201ENST00000523889 1271 ntBASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 AP003181.2-201ENST00000528941 181 ntBASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 ZNF861P-201ENST00000588126 639 ntBASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 AL161729.4-201ENST00000604650 476 ntBASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 AC008277.2-201ENST00000605196 797 ntBASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 AP000860.1-201ENST00000605250 559 ntBASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 AC103710.2-201ENST00000609912 942 ntBASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC197Q8NCU1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 RNU6-1027P-201ENST00000383998 107 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 RPL21P75-201ENST00000396599 483 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 RPL21P28-201ENST00000401418 483 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AL592114.1-201ENST00000403842 483 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 FCF1P10-201ENST00000407590 479 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 RNU2-62P-201ENST00000410868 191 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 ZNF90P2-204ENST00000419323 1075 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AL353678.1-201ENST00000422735 741 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 TAF9P1-201ENST00000445421 515 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 PDSS1P2-201ENST00000449397 678 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 RPS27AP8-201ENST00000452665 445 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 TAF9P2-201ENST00000454958 515 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AC013267.1-201ENST00000458227 267 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 RPS29P12-201ENST00000460178 152 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 RPL21P39-201ENST00000463605 483 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 RPL21P93-201ENST00000480465 489 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AC233702.1-201ENST00000482905 502 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 SRIP1-201ENST00000489235 288 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AC093591.1-201ENST00000491435 481 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 RPL21P129-201ENST00000491732 478 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 RPL21P16-201ENST00000495531 483 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 DSTNP2-201ENST00000504533 515 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AC118465.1-201ENST00000513820 1271 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 ATP5F1P5-201ENST00000526403 760 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AC068135.2-201ENST00000569293 1028 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AC136601.2-201ENST00000604356 474 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AC121247.2-201ENST00000604776 136 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AL355365.1-201ENST00000616480 294 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AC022079.1-201ENST00000621546 602 ntBASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC197Q8NCU1 ZNF271P-202ENST00000465539 1970 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 RNU6-198P-201ENST00000384258 104 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 NDUFS5P1-201ENST00000405668 289 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 RNU2-36P-201ENST00000410361 191 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.74□□□□□ -1.97
CCDC197Q8NCU1 PGBD4P3-201ENST00000440731 581 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms