Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AL139124.1-201ENST00000609123 421 ntBASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 MIR6133-201ENST00000617057 108 ntBASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 U73479.1-201ENST00000618062 168 ntBASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 ASNSP1-201ENST00000518311 1939 ntBASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 AC009812.4-201ENST00000569134 1805 ntBASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC116Q8IYX3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 RNA5SP361-201ENST00000362686 118 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 Y_RNA.136-201ENST00000363444 102 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 Y_RNA.215-201ENST00000364204 112 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 RNA5SP205-201ENST00000364653 136 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 Y_RNA.597-201ENST00000410463 100 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 AC024067.1-201ENST00000426199 223 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 BX276092.6-201ENST00000430476 250 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 NDUFB4P8-201ENST00000435351 367 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 AC073465.2-201ENST00000440938 498 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 GAPDHP25-201ENST00000447061 1001 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 AL359073.1-201ENST00000448036 403 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 BTF3P6-201ENST00000448054 499 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 MRPS10P1-201ENST00000448483 130 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 EIF4A1P11-201ENST00000451239 222 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 BX276092.8-201ENST00000455722 250 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 AC117440.1-201ENST00000474107 571 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 RPL26P26-201ENST00000480251 434 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 RPL23AP75-201ENST00000491601 451 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 AC022790.1-201ENST00000522872 204 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 AP004609.2-201ENST00000532177 190 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 AL645944.1-201ENST00000603857 493 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 AC100821.1-201ENST00000523153 2479 ntBASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CCDC116Q8IYX3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 SNORA70.6-201ENST00000383934 134 ntBASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 Y_RNA.570-201ENST00000384750 101 ntBASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 RNU1-139P-201ENST00000391307 165 ntBASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 UBA52P6-201ENST00000399822 382 ntBASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 RPL23AP26-201ENST00000412728 464 ntBASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 AL035461.1-201ENST00000421490 332 ntBASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 AC011742.1-201ENST00000431448 434 ntBASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 AL590399.6-201ENST00000446396 307 ntBASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 PPIAP20-201ENST00000449839 135 ntBASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 AP000870.1-201ENST00000472927 406 ntBASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 AL049874.1-201ENST00000489560 388 ntBASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 RNU6-426P-201ENST00000516464 97 ntBASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 AC010547.6-201ENST00000571789 193 ntBASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 MIR4505-201ENST00000582238 73 ntBASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 AC005828.6-201ENST00000606610 232 ntBASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC116Q8IYX3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 AC006206.1-201ENST00000544842 3387 ntBASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 AL079305.1-201ENST00000623159 3008 ntBASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 AL022311.1-201ENST00000623726 19416 ntBASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 Y_RNA.273-201ENST00000364703 102 ntBASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 RNU5E-7P-201ENST00000365290 117 ntBASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 RNU6-968P-201ENST00000384076 107 ntBASIC5.17□□□□□ -1.58
CCDC116Q8IYX3 MIR32-201ENST00000384965 70 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms