Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 MIR3199-1-201ENST00000582434 88 ntBASIC1.97□□□□□ -2.09
MRPL55Q7Z7F7 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC1.97□□□□□ -2.09
MRPL55Q7Z7F7 AL451007.1-201ENST00000595491 289 ntBASIC1.97□□□□□ -2.09
MRPL55Q7Z7F7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC1.97□□□□□ -2.09
MRPL55Q7Z7F7 AC073544.2-201ENST00000601155 540 ntBASIC1.97□□□□□ -2.09
MRPL55Q7Z7F7 AL021997.1-201ENST00000605757 193 ntBASIC1.97□□□□□ -2.09
MRPL55Q7Z7F7 AL139022.2-201ENST00000606934 443 ntBASIC1.97□□□□□ -2.09
MRPL55Q7Z7F7 AC091965.4-201ENST00000607691 587 ntBASIC1.97□□□□□ -2.09
MRPL55Q7Z7F7 AC103710.1-201ENST00000610003 901 ntBASIC1.97□□□□□ -2.09
MRPL55Q7Z7F7 AC092106.3-201ENST00000611308 722 ntBASIC1.97□□□□□ -2.09
MRPL55Q7Z7F7 MIR6895-201ENST00000613497 78 ntBASIC1.97□□□□□ -2.09
MRPL55Q7Z7F7 AC245884.12-201ENST00000615364 59 ntBASIC1.97□□□□□ -2.09
MRPL55Q7Z7F7 AC138932.5-201ENST00000617759 563 ntBASIC1.97□□□□□ -2.09
MRPL55Q7Z7F7 AC007998.5-201ENST00000622938 237 ntBASIC1.97□□□□□ -2.09
MRPL55Q7Z7F7 AC091965.5-201ENST00000624785 342 ntBASIC1.97□□□□□ -2.09
MRPL55Q7Z7F7 MIR6733-201ENST00000635723 61 ntBASIC1.97□□□□□ -2.09
MRPL55Q7Z7F7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.97□□□□□ -2.09
MRPL55Q7Z7F7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
MRPL55Q7Z7F7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.09
MRPL55Q7Z7F7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 NACAP2-201ENST00000318548 624 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 MIR218-1-201ENST00000384999 110 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 RSL24D1P4-201ENST00000400938 484 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 SNORD88.1-201ENST00000408684 91 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 RNU4-47P-201ENST00000410876 114 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 AC104651.1-201ENST00000427559 735 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 EEF1B2P7-201ENST00000451177 676 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 GSTA11P-201ENST00000452866 669 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 AC027673.1-201ENST00000456245 405 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 RN7SL75P-201ENST00000461926 281 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 RN7SL863P-201ENST00000462370 296 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 RPL23AP11-201ENST00000475260 469 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 MRPL42P6-201ENST00000486397 371 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 RN7SKP43-201ENST00000516173 320 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 MTND1P8-201ENST00000571424 950 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 ROCK1P1-201ENST00000573767 549 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 TMF1P1-201ENST00000576058 373 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 MIR5571-201ENST00000577998 113 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 MTCO2P2-201ENST00000591258 225 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 AC023043.3-201ENST00000593113 385 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 PRELID3BP8-201ENST00000604148 295 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 AL358072.1-201ENST00000604156 575 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 AL355598.1-201ENST00000604169 202 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 AL391813.2-201ENST00000609113 322 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 AC107294.1-201ENST00000609524 467 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 AC006927.4-201ENST00000639187 543 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 MTND4P16-201ENST00000466108 1367 ntBASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
MRPL55Q7Z7F7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 Z98749.2-208ENST00000381646 500 ntBASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 RNU6-658P-201ENST00000384606 106 ntBASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 MIR449B-201ENST00000384995 97 ntBASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 MIR134-201ENST00000385258 73 ntBASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 AL356967.1-201ENST00000406305 431 ntBASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 AL035407.1-201ENST00000429211 571 ntBASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 RPL30P4-201ENST00000429309 333 ntBASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 TIMM9P1-201ENST00000436122 256 ntBASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 AL161651.1-201ENST00000440882 223 ntBASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 AC016696.1-201ENST00000446949 318 ntBASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 AC008155.2-201ENST00000464337 397 ntBASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 RN7SL633P-201ENST00000488974 297 ntBASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 AC026801.1-201ENST00000497178 464 ntBASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 GZMAP1-201ENST00000503054 631 ntBASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.95□□□□□ -2.1
MRPL55Q7Z7F7 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms