Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 AC025459.1-201ENST00000504072 156 ntBASIC1.7□□□□□ -2.14
USP54Q70EL1 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
USP54Q70EL1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.7□□□□□ -2.14
USP54Q70EL1 AC106028.5-201ENST00000610332 395 ntBASIC1.7□□□□□ -2.14
USP54Q70EL1 MKKS-204ENST00000639674 192 ntBASIC1.7□□□□□ -2.14
USP54Q70EL1 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
USP54Q70EL1 RNU6-1226P-201ENST00000384317 107 ntBASIC1.69□□□□□ -2.14
USP54Q70EL1 AL136372.1-201ENST00000403060 228 ntBASIC1.69□□□□□ -2.14
USP54Q70EL1 RPS15AP38-201ENST00000413110 372 ntBASIC1.69□□□□□ -2.14
USP54Q70EL1 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.69□□□□□ -2.14
USP54Q70EL1 AC004865.1-201ENST00000442276 1003 ntBASIC1.69□□□□□ -2.14
USP54Q70EL1 AC092685.1-201ENST00000447960 1243 ntBASIC1.69□□□□□ -2.14
USP54Q70EL1 SNRPGP6-201ENST00000451124 220 ntBASIC1.69□□□□□ -2.14
USP54Q70EL1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.69□□□□□ -2.14
USP54Q70EL1 RPS27P21-201ENST00000486977 252 ntBASIC1.69□□□□□ -2.14
USP54Q70EL1 AC113155.1-201ENST00000511141 769 ntBASIC1.69□□□□□ -2.14
USP54Q70EL1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.69□□□□□ -2.14
USP54Q70EL1 AC090821.2-201ENST00000523552 176 ntBASIC1.69□□□□□ -2.14
USP54Q70EL1 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.69□□□□□ -2.14
USP54Q70EL1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.69□□□□□ -2.14
USP54Q70EL1 AC002487.1-201ENST00000604565 994 ntBASIC1.69□□□□□ -2.14
USP54Q70EL1 AL360181.4-201ENST00000621752 134 ntBASIC1.69□□□□□ -2.14
USP54Q70EL1 AL031601.2-202ENST00000622650 282 ntBASIC1.69□□□□□ -2.14
USP54Q70EL1 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.69□□□□□ -2.14
USP54Q70EL1 AC007342.9-201ENST00000623877 1385 ntBASIC1.69□□□□□ -2.14
USP54Q70EL1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.68□□□□□ -2.14
USP54Q70EL1 DSTNP4-201ENST00000399472 474 ntBASIC1.68□□□□□ -2.14
USP54Q70EL1 RPS12P24-201ENST00000412619 387 ntBASIC1.68□□□□□ -2.14
USP54Q70EL1 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.68□□□□□ -2.14
USP54Q70EL1 AL445687.1-201ENST00000439946 251 ntBASIC1.68□□□□□ -2.14
USP54Q70EL1 AC097499.1-201ENST00000444277 208 ntBASIC1.68□□□□□ -2.14
USP54Q70EL1 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.68□□□□□ -2.14
USP54Q70EL1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.68□□□□□ -2.14
USP54Q70EL1 AC019176.1-201ENST00000518519 225 ntBASIC1.68□□□□□ -2.14
USP54Q70EL1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.68□□□□□ -2.14
USP54Q70EL1 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.68□□□□□ -2.14
USP54Q70EL1 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
USP54Q70EL1 HSPE1P3-201ENST00000559254 309 ntBASIC1.68□□□□□ -2.14
USP54Q70EL1 AC090666.1-201ENST00000578241 445 ntBASIC1.68□□□□□ -2.14
USP54Q70EL1 AC097504.2-201ENST00000608088 454 ntBASIC1.68□□□□□ -2.14
USP54Q70EL1 AC098657.3-201ENST00000620434 263 ntBASIC1.68□□□□□ -2.14
USP54Q70EL1 AL513185.3-201ENST00000433335 1300 ntBASIC1.68□□□□□ -2.14
USP54Q70EL1 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
USP54Q70EL1 MTND5P10-201ENST00000603719 1809 ntBASIC1.68□□□□□ -2.14
USP54Q70EL1 SNORD114-27-201ENST00000363766 70 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 RNU6-234P-201ENST00000365229 104 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 RNU6-203P-201ENST00000384038 104 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 AC016769.3-201ENST00000396562 315 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 AL590233.1-201ENST00000430017 456 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.67□□□□□ -2.14
USP54Q70EL1 BZW1P2-201ENST00000473537 826 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 SUMO2P6-201ENST00000505273 288 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
USP54Q70EL1 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.67□□□□□ -2.14
USP54Q70EL1 MIR449C-201ENST00000516047 92 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 MIR514B-201ENST00000516774 80 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 SNORA31.23-201ENST00000517219 133 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.67□□□□□ -2.14
USP54Q70EL1 AC027104.1-201ENST00000563702 681 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.67□□□□□ -2.14
USP54Q70EL1 U73023.1-201ENST00000603134 700 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 AC025588.4-201ENST00000615802 908 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 AC091895.1-201ENST00000624494 256 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 AC068620.4-201ENST00000636730 1182 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 AC119674.1-220ENST00000641502 1048 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
USP54Q70EL1 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
USP54Q70EL1 AL355497.1-201ENST00000406262 551 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 UBE2V1P9-201ENST00000414760 368 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.67□□□□□ -2.14
USP54Q70EL1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.67□□□□□ -2.14
USP54Q70EL1 AC234781.2-201ENST00000426370 994 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.67□□□□□ -2.14
USP54Q70EL1 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.67□□□□□ -2.14
USP54Q70EL1 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 AC010099.1-201ENST00000455434 375 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
USP54Q70EL1 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.67□□□□□ -2.14
USP54Q70EL1 AL731537.2-201ENST00000561565 951 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 MTCO1P40-201ENST00000574371 625 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 FAM106DP-201ENST00000586416 501 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 AL669831.4-202ENST00000590817 238 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 AC013553.2-201ENST00000604244 589 ntBASIC1.67□□□□□ -2.14
USP54Q70EL1 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.67□□□□□ -2.14
USP54Q70EL1 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
USP54Q70EL1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
USP54Q70EL1 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
USP54Q70EL1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
USP54Q70EL1 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
USP54Q70EL1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
USP54Q70EL1 Y_RNA.493-201ENST00000384422 102 ntBASIC1.66□□□□□ -2.14
USP54Q70EL1 MIR598-201ENST00000384868 97 ntBASIC1.66□□□□□ -2.14
USP54Q70EL1 AL033519.2-201ENST00000403958 392 ntBASIC1.66□□□□□ -2.14
USP54Q70EL1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.66□□□□□ -2.14
USP54Q70EL1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.66□□□□□ -2.14
USP54Q70EL1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.66□□□□□ -2.14
USP54Q70EL1 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.66□□□□□ -2.14
USP54Q70EL1 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.66□□□□□ -2.14
USP54Q70EL1 MTCYBP35-201ENST00000503630 1137 ntBASIC1.66□□□□□ -2.14
USP54Q70EL1 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms