Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC091390.1-201ENST00000433904 331 ntBASIC3.91□□□□□ -1.78
PPP4R4Q6NUP7 AL591212.2-201ENST00000433923 257 ntBASIC3.91□□□□□ -1.78
PPP4R4Q6NUP7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.91□□□□□ -1.78
PPP4R4Q6NUP7 AC073415.1-201ENST00000449240 153 ntBASIC3.91□□□□□ -1.78
PPP4R4Q6NUP7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.91□□□□□ -1.78
PPP4R4Q6NUP7 GMFBP1-201ENST00000467831 427 ntBASIC3.91□□□□□ -1.78
PPP4R4Q6NUP7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.91□□□□□ -1.78
PPP4R4Q6NUP7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.91□□□□□ -1.78
PPP4R4Q6NUP7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.91□□□□□ -1.78
PPP4R4Q6NUP7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PPP4R4Q6NUP7 AC027807.1-201ENST00000559921 996 ntBASIC3.91□□□□□ -1.78
PPP4R4Q6NUP7 BNIP3P9-201ENST00000603714 553 ntBASIC3.91□□□□□ -1.78
PPP4R4Q6NUP7 AP005264.7-201ENST00000625003 745 ntBASIC3.91□□□□□ -1.78
PPP4R4Q6NUP7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PPP4R4Q6NUP7 AC244205.2-202ENST00000635781 342 ntBASIC3.91□□□□□ -1.78
PPP4R4Q6NUP7 MIR1321-201ENST00000637766 79 ntBASIC3.91□□□□□ -1.78
PPP4R4Q6NUP7 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.91□□□□□ -1.78
PPP4R4Q6NUP7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.91□□□□□ -1.78
PPP4R4Q6NUP7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PPP4R4Q6NUP7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PPP4R4Q6NUP7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
PPP4R4Q6NUP7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
PPP4R4Q6NUP7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
PPP4R4Q6NUP7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 RNA5SP36-201ENST00000410197 133 ntBASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 MTCYBP5-201ENST00000423752 1135 ntBASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 AL592045.1-201ENST00000429867 352 ntBASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 FGF7P6-202ENST00000451282 293 ntBASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 MTCO3P9-201ENST00000506989 781 ntBASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 AC108475.1-201ENST00000507880 950 ntBASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 RNA5SP165-201ENST00000517142 115 ntBASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 SUMO2P20-201ENST00000520803 283 ntBASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 PARP1P2-201ENST00000556806 195 ntBASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 AL391261.3-201ENST00000557194 520 ntBASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 MIR15A-201ENST00000607334 83 ntBASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 U6atac.1-201ENST00000616025 117 ntBASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 AC010338.1-201ENST00000621823 717 ntBASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 U2.21-201ENST00000637295 81 ntBASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 AL158163.1-201ENST00000603915 1649 ntBASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
PPP4R4Q6NUP7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 TNPO1P3-201ENST00000436471 2662 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 MIR383-201ENST00000362257 73 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 Y_RNA.9-201ENST00000362354 101 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 RNU1-18P-201ENST00000363062 164 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 RNU6-996P-201ENST00000365438 107 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 SNORA69-201ENST00000383895 132 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 RNU6-550P-201ENST00000391057 101 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 AL591704.1-201ENST00000432574 275 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 MTND1P18-201ENST00000448191 573 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 FABP5P13-201ENST00000452144 328 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 RNU7-23P-201ENST00000459465 62 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 RNU6-914P-201ENST00000516749 109 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 RNA5SP503-201ENST00000517047 117 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 RNU6-1231P-201ENST00000517185 103 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 MIR5047-201ENST00000579212 100 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 AL354984.3-201ENST00000604803 325 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 DUSP12P1-201ENST00000612874 516 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 AC083809.1-201ENST00000615051 472 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 AL354950.2-201ENST00000617939 290 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 AC099506.2-201ENST00000623074 221 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 IPO8P1-201ENST00000455509 3109 ntBASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PPP4R4Q6NUP7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 UBE3AP2-201ENST00000429033 2259 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 AL354685.2-201ENST00000448218 1447 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 HSPA8P4-201ENST00000511877 1920 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 RNU6-799P-201ENST00000363567 107 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 Y_RNA.481-201ENST00000384373 102 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 AL583835.1-201ENST00000399570 407 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 RNU2-68P-201ENST00000410878 191 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 EEF1A1P40-201ENST00000412883 573 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 AC009237.5-201ENST00000414271 501 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 MTCO1P20-201ENST00000425366 358 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 CALM2P2-201ENST00000428512 440 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 AL596276.1-201ENST00000434465 418 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms