Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 NOL8P1-201ENST00000508336 3529 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 MTND5P1-201ENST00000445440 1375 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AC010733.2-201ENST00000589496 5702 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 RNU6-1120P-201ENST00000362988 108 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 RNA5SP399-201ENST00000364003 117 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 RNU5E-6P-201ENST00000365574 115 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 RNU6-641P-201ENST00000384006 107 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 U1.1-201ENST00000384101 164 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AC018630.2-202ENST00000422992 927 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AL513185.2-201ENST00000425543 193 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AL606489.2-201ENST00000433886 234 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 RPS20P20-201ENST00000460498 340 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 RPL21P11-201ENST00000461458 483 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 RPL39P36-201ENST00000490784 156 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AC104619.4-201ENST00000510773 249 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 FTH1P9-201ENST00000513251 355 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 Y_RNA.675-201ENST00000516389 149 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 SCARNA14-201ENST00000516903 136 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 RNU6-1073P-201ENST00000517182 106 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 OR4R1P-201ENST00000529879 463 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AC103843.2-201ENST00000530523 682 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AC012443.1-201ENST00000605605 231 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 RMST_3.1-201ENST00000611651 109 ntBASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC44A4Q53GD3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 AP001350.1-201ENST00000601906 1524 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 Y_RNA.142-201ENST00000363491 102 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 Y_RNA.481-201ENST00000384373 102 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 RNU6-1158P-201ENST00000391167 107 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 EI24P1-201ENST00000416584 867 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 MED13P1-201ENST00000428342 171 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 AL136097.1-201ENST00000456945 913 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 AC006512.1-201ENST00000468816 291 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 AC108860.1-201ENST00000484521 383 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 RPL36AP51-201ENST00000487216 318 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 RPL7P47-201ENST00000497299 556 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 RNU6-840P-201ENST00000517275 65 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 ERHP1-201ENST00000523006 310 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 OR4H12P-201ENST00000556269 907 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 AC037471.2-201ENST00000564941 598 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 AC006270.2-201ENST00000578523 652 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 MIR5195-201ENST00000583555 115 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 MIR4795-201ENST00000584182 89 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 MIR3922-201ENST00000585192 84 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 AL442067.2-201ENST00000614033 363 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 AC126177.8-201ENST00000618339 1015 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 MIR7975-201ENST00000619350 68 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 AL360181.4-201ENST00000621752 134 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 YWHAEP7-203ENST00000622054 312 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 AC110801.1-201ENST00000623590 212 ntBASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC44A4Q53GD3 MAPK10-373ENST00000641983 6772 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4□□□□□ -1.77
SLC44A4Q53GD3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4□□□□□ -1.77
SLC44A4Q53GD3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SLC44A4Q53GD3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SLC44A4Q53GD3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4□□□□□ -1.77
SLC44A4Q53GD3 RNU6-600P-201ENST00000362524 99 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 RNU6-1284P-201ENST00000363701 100 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 RNY3P3-201ENST00000363816 102 ntBASIC4□□□□□ -1.77
SLC44A4Q53GD3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms