Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC38Q502W7 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CCDC38Q502W7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC38Q502W7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC38Q502W7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC38Q502W7 RPL23AP30-201ENST00000432419 501 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 AC022364.2-201ENST00000457963 554 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 RPL7P5-201ENST00000471472 736 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 AC126389.1-201ENST00000477436 290 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 HMGB1P29-201ENST00000505659 499 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 SLC25A15P5-201ENST00000508033 253 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC38Q502W7 AC110768.1-201ENST00000509222 400 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC38Q502W7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC38Q502W7 SNORA31.1-201ENST00000515993 133 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 SNORA31.5-201ENST00000516190 133 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 RNU6-677P-201ENST00000516914 101 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC38Q502W7 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC38Q502W7 AC034105.4-201ENST00000568304 277 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 MIR5685-201ENST00000579080 79 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 AC136601.2-201ENST00000604356 474 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 AL161798.1-201ENST00000604630 131 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 AC087241.4-201ENST00000612441 480 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 AC009161.2-201ENST00000624626 138 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC38Q502W7 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
CCDC38Q502W7 MTND5P42-201ENST00000637720 498 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC38Q502W7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC38Q502W7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC38Q502W7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC38Q502W7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC38Q502W7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC38Q502W7 MIR30E-201ENST00000362104 92 ntBASIC3.7□□□□□ -1.82
CCDC38Q502W7 RN7SKP280-201ENST00000364196 304 ntBASIC3.7□□□□□ -1.82
CCDC38Q502W7 RNU6-1035P-201ENST00000384477 107 ntBASIC3.7□□□□□ -1.82
CCDC38Q502W7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
CCDC38Q502W7 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC38Q502W7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC38Q502W7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC38Q502W7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC38Q502W7 ZNF863P-201ENST00000426746 417 ntBASIC3.7□□□□□ -1.82
CCDC38Q502W7 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC38Q502W7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC38Q502W7 MTND4P25-201ENST00000441039 533 ntBASIC3.7□□□□□ -1.82
CCDC38Q502W7 SNORA84-201ENST00000459229 133 ntBASIC3.7□□□□□ -1.82
CCDC38Q502W7 HMGN2P13-201ENST00000476476 274 ntBASIC3.7□□□□□ -1.82
CCDC38Q502W7 RPL39P36-201ENST00000490784 156 ntBASIC3.7□□□□□ -1.82
CCDC38Q502W7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC38Q502W7 RPL37P25-201ENST00000507308 276 ntBASIC3.7□□□□□ -1.82
CCDC38Q502W7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC38Q502W7 APOOP4-201ENST00000513530 597 ntBASIC3.7□□□□□ -1.82
CCDC38Q502W7 RNA5SP471-201ENST00000516971 106 ntBASIC3.7□□□□□ -1.82
CCDC38Q502W7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC38Q502W7 AC007991.1-201ENST00000522680 631 ntBASIC3.7□□□□□ -1.82
CCDC38Q502W7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC38Q502W7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC38Q502W7 SUB1P2-201ENST00000556401 297 ntBASIC3.7□□□□□ -1.82
CCDC38Q502W7 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC38Q502W7 AC006504.3-201ENST00000586818 523 ntBASIC3.7□□□□□ -1.82
CCDC38Q502W7 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC38Q502W7 AL121992.2-201ENST00000606262 256 ntBASIC3.7□□□□□ -1.82
CCDC38Q502W7 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC38Q502W7 AC007496.3-201ENST00000624987 3443 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC38Q502W7 RNU6-288P-201ENST00000363690 104 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 RNU6-217P-201ENST00000384164 104 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 RNU6-74P-201ENST00000384235 107 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC38Q502W7 RPS12P24-201ENST00000412619 387 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 AC114491.1-201ENST00000416095 246 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 ELOCP14-201ENST00000428070 331 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC38Q502W7 AC073464.1-201ENST00000429823 534 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 MTATP6P16-201ENST00000434543 526 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 RPL23AP22-201ENST00000437556 453 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 ELOCP7-201ENST00000439968 331 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 DNAJC19P4-201ENST00000440115 345 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 HMGB3P11-201ENST00000440127 604 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 NANOGNBP1-201ENST00000448444 480 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 AC011825.1-201ENST00000484967 388 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 RPL21P129-201ENST00000491732 478 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 AC116562.3-201ENST00000506136 177 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 RNU6-579P-201ENST00000516879 102 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC38Q502W7 AP006245.1-201ENST00000522549 120 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 AC068587.5-201ENST00000528506 175 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 OR5B19P-201ENST00000531766 928 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC38Q502W7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC38Q502W7 AL163153.1-201ENST00000554223 283 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 AL022154.1-201ENST00000604698 785 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 RNU1-30P-201ENST00000606575 163 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 MIR92B-201ENST00000607575 96 ntBASIC3.69□□□□□ -1.82
CCDC38Q502W7 AC073534.2-201ENST00000620377 381 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms