Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 RNU2-66P-201ENST00000410650 161 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.44□□□□□ -1.86
USP41Q3LFD5 ELOCP4-201ENST00000420090 333 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 RPL23AP82-202ENST00000427528 469 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 AC008850.1-201ENST00000427546 362 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 AC005094.1-201ENST00000440420 368 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.44□□□□□ -1.86
USP41Q3LFD5 CENPBD1P1-201ENST00000464061 469 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 AL049714.1-201ENST00000466686 347 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 AP002884.2-201ENST00000471647 395 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 AL049874.1-201ENST00000489560 388 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.44□□□□□ -1.86
USP41Q3LFD5 AC092185.1-201ENST00000491371 97 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 AC138853.1-201ENST00000503549 823 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 HMGB3P15-201ENST00000507326 574 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 Vault.3-201ENST00000516676 95 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
USP41Q3LFD5 AC022880.1-201ENST00000534017 973 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 SYF2P1-201ENST00000550658 413 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.44□□□□□ -1.86
USP41Q3LFD5 OR4H12P-201ENST00000556269 907 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.44□□□□□ -1.86
USP41Q3LFD5 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.44□□□□□ -1.86
USP41Q3LFD5 BDH2P1-201ENST00000602288 736 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.44□□□□□ -1.86
USP41Q3LFD5 AC106900.2-201ENST00000604994 317 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 NDUFA8P1-201ENST00000605525 367 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 AL451064.1-201ENST00000607718 471 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 AC099778.2-201ENST00000610904 211 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.44□□□□□ -1.86
USP41Q3LFD5 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
USP41Q3LFD5 MIR4275-201ENST00000636486 87 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.44□□□□□ -1.86
USP41Q3LFD5 AC092447.7-201ENST00000422212 1621 ntBASIC3.44□□□□□ -1.86
USP41Q3LFD5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
USP41Q3LFD5 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
USP41Q3LFD5 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
USP41Q3LFD5 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
USP41Q3LFD5 RNU1-140P-201ENST00000365040 165 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 DEFB109C-201ENST00000382575 264 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 DEFB109B-201ENST00000382656 264 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 SNORA20.2-201ENST00000383922 131 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 AL122016.1-201ENST00000403365 367 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 TXNP7-201ENST00000406296 293 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 AC104651.1-201ENST00000427559 735 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 RPL7L1P10-201ENST00000427790 463 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 NANOGNBP1-201ENST00000448444 480 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 ELOCP23-201ENST00000452014 332 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 MTND2P24-201ENST00000453434 806 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 AC010631.1-201ENST00000474150 156 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 RBM43P1-201ENST00000476891 1081 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 HSPE1P6-201ENST00000479457 291 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
USP41Q3LFD5 CDC42P4-201ENST00000510507 563 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 AC104027.1-201ENST00000521887 300 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 AP002404.1-201ENST00000532005 451 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 MIR2682-201ENST00000580305 110 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 AC105224.1-201ENST00000587055 421 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 MIR98-201ENST00000606724 119 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 AP002826.1-201ENST00000608835 315 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 AC004696.1-201ENST00000614345 607 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 AC015540.1-201ENST00000615828 501 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 AC084035.1-201ENST00000634543 607 ntBASIC3.43□□□□□ -1.86
USP41Q3LFD5 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
USP41Q3LFD5 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.43□□□□□ -1.86
USP41Q3LFD5 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
USP41Q3LFD5 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
USP41Q3LFD5 ZNF807-201ENST00000328088 1707 ntBASIC3.42□□□□□ -1.86
USP41Q3LFD5 MTND5P27-201ENST00000428871 1720 ntBASIC3.42□□□□□ -1.86
USP41Q3LFD5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
USP41Q3LFD5 OR5J1P-201ENST00000313544 939 ntBASIC3.42□□□□□ -1.86
USP41Q3LFD5 RNY1P12-201ENST00000364251 105 ntBASIC3.42□□□□□ -1.86
USP41Q3LFD5 RNU5A-6P-201ENST00000384136 116 ntBASIC3.42□□□□□ -1.86
USP41Q3LFD5 SNORA7.4-201ENST00000384249 137 ntBASIC3.42□□□□□ -1.86
USP41Q3LFD5 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
USP41Q3LFD5 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
USP41Q3LFD5 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
USP41Q3LFD5 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms