Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC241520.1-201ENST00000422654 1099 ntBASIC0.76□□□□□ -2.29
PRKDCP78527 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.76□□□□□ -2.29
PRKDCP78527 MTND3P24-201ENST00000506306 329 ntBASIC0.76□□□□□ -2.29
PRKDCP78527 AC106052.1-201ENST00000608029 497 ntBASIC0.76□□□□□ -2.29
PRKDCP78527 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.76□□□□□ -2.29
PRKDCP78527 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.76□□□□□ -2.29
PRKDCP78527 Z69720.2-201ENST00000624755 279 ntBASIC0.76□□□□□ -2.29
PRKDCP78527 AC008669.1-201ENST00000565823 2178 ntBASIC0.76□□□□□ -2.29
PRKDCP78527 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
PRKDCP78527 AC093852.1-201ENST00000503587 266 ntBASIC0.76□□□□□ -2.29
PRKDCP78527 AK3P2-201ENST00000507976 429 ntBASIC0.76□□□□□ -2.29
PRKDCP78527 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC0.76□□□□□ -2.29
PRKDCP78527 AC104229.1-201ENST00000561364 255 ntBASIC0.76□□□□□ -2.29
PRKDCP78527 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.76□□□□□ -2.29
PRKDCP78527 MIR4714-201ENST00000580728 77 ntBASIC0.76□□□□□ -2.29
PRKDCP78527 AC008083.4-201ENST00000615076 444 ntBASIC0.76□□□□□ -2.29
PRKDCP78527 CENPCP1-201ENST00000533085 2578 ntBASIC0.76□□□□□ -2.29
PRKDCP78527 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC0.75□□□□□ -2.29
PRKDCP78527 SNORD114-23-201ENST00000363536 72 ntBASIC0.75□□□□□ -2.29
PRKDCP78527 RNU6-997P-201ENST00000384725 107 ntBASIC0.75□□□□□ -2.29
PRKDCP78527 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC0.75□□□□□ -2.29
PRKDCP78527 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.75□□□□□ -2.29
PRKDCP78527 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC0.75□□□□□ -2.29
PRKDCP78527 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.75□□□□□ -2.29
PRKDCP78527 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
PRKDCP78527 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.75□□□□□ -2.29
PRKDCP78527 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC0.75□□□□□ -2.29
PRKDCP78527 GAS5-AS1-201ENST00000602767 694 ntBASIC0.75□□□□□ -2.29
PRKDCP78527 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
PRKDCP78527 RNU6-105P-201ENST00000363909 104 ntBASIC0.75□□□□□ -2.29
PRKDCP78527 RNU6-317P-201ENST00000384031 107 ntBASIC0.75□□□□□ -2.29
PRKDCP78527 ARL5AP2-201ENST00000444698 533 ntBASIC0.75□□□□□ -2.29
PRKDCP78527 MRPL42P6-201ENST00000486397 371 ntBASIC0.75□□□□□ -2.29
PRKDCP78527 MTCO2P32-201ENST00000514865 403 ntBASIC0.75□□□□□ -2.29
PRKDCP78527 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC0.75□□□□□ -2.29
PRKDCP78527 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC0.75□□□□□ -2.29
PRKDCP78527 AP003117.1-201ENST00000602771 554 ntBASIC0.75□□□□□ -2.29
PRKDCP78527 AL713998.2-201ENST00000604538 1198 ntBASIC0.75□□□□□ -2.29
PRKDCP78527 ZNF37BP-203ENST00000452306 1352 ntBASIC0.75□□□□□ -2.29
PRKDCP78527 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
PRKDCP78527 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
PRKDCP78527 CBX3P7-201ENST00000532876 502 ntBASIC0.75□□□□□ -2.29
PRKDCP78527 ANP32BP3-201ENST00000559213 706 ntBASIC0.75□□□□□ -2.29
PRKDCP78527 AC108706.1-201ENST00000611053 297 ntBASIC0.75□□□□□ -2.29
PRKDCP78527 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
PRKDCP78527 MTND4P12-201ENST00000498999 1377 ntBASIC0.75□□□□□ -2.29
PRKDCP78527 AC123912.3-201ENST00000600907 1367 ntBASIC0.75□□□□□ -2.29
PRKDCP78527 MIR150-201ENST00000385048 84 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 RNA5SP465-201ENST00000391195 109 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 AL500527.1-201ENST00000448532 255 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 RPL21P93-201ENST00000480465 489 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 AC233702.1-201ENST00000482905 502 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 AC093591.1-201ENST00000491435 481 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.74□□□□□ -2.29
PRKDCP78527 HSPE1P20-201ENST00000538133 289 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC0.74□□□□□ -2.29
PRKDCP78527 AC004808.1-201ENST00000627671 721 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
PRKDCP78527 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.74□□□□□ -2.29
PRKDCP78527 OR51A5P-201ENST00000415429 942 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 CST2P1-201ENST00000425770 87 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 UBE2FP3-201ENST00000436366 524 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 PGBD4P3-201ENST00000440731 581 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 AL357134.1-201ENST00000445848 426 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 RPL7P18-201ENST00000478965 734 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 AC090096.1-201ENST00000489168 390 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.74□□□□□ -2.29
PRKDCP78527 AC138473.1-201ENST00000605717 526 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 AC021755.4-201ENST00000616620 456 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
PRKDCP78527 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
PRKDCP78527 RNU1-105P-201ENST00000363470 161 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 SNORA6-201ENST00000384033 151 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 MIR153-1-201ENST00000384914 90 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 RNA5SP193-201ENST00000410353 107 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.74□□□□□ -2.29
PRKDCP78527 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.74□□□□□ -2.29
PRKDCP78527 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.74□□□□□ -2.29
PRKDCP78527 AL158032.1-201ENST00000605401 106 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 AC091932.3-201ENST00000624223 323 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
PRKDCP78527 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
PRKDCP78527 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
PRKDCP78527 Y_RNA.280-201ENST00000364765 112 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
PRKDCP78527 MIR936-201ENST00000401264 98 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 FO393413.1-201ENST00000402892 195 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 NUP35P2-201ENST00000416748 943 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.74□□□□□ -2.29
PRKDCP78527 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.74□□□□□ -2.29
PRKDCP78527 AP000949.1-201ENST00000438328 629 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.74□□□□□ -2.29
PRKDCP78527 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC0.74□□□□□ -2.29
PRKDCP78527 CDC42P4-201ENST00000510507 563 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 OR4R1P-201ENST00000529879 463 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 NOP56P3-201ENST00000549457 385 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.74□□□□□ -2.29
PRKDCP78527 AC019131.2-201ENST00000609071 870 ntBASIC0.74□□□□□ -2.29
PRKDCP78527 AC010889.1-201ENST00000566193 2666 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms