Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC079395.3-201ENST00000615161 484 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 AL031601.2-202ENST00000622650 282 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 AC009812.4-201ENST00000569134 1805 ntBASIC1.28□□□□□ -2.21
ABCA4P78363 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.27□□□□□ -2.21
ABCA4P78363 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
ABCA4P78363 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
ABCA4P78363 RNU6-670P-201ENST00000364312 104 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.27□□□□□ -2.21
ABCA4P78363 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.27□□□□□ -2.21
ABCA4P78363 SEPT2P1-201ENST00000419651 180 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.27□□□□□ -2.21
ABCA4P78363 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.27□□□□□ -2.21
ABCA4P78363 AC244505.5-201ENST00000443639 207 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 OR6K5P-201ENST00000447050 945 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 AC017099.1-201ENST00000448261 1028 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.27□□□□□ -2.21
ABCA4P78363 RPS29P1-201ENST00000465274 159 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 MTCO2P9-201ENST00000503214 694 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.27□□□□□ -2.21
ABCA4P78363 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.27□□□□□ -2.21
ABCA4P78363 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.27□□□□□ -2.21
ABCA4P78363 CYCSP26-201ENST00000534107 320 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.27□□□□□ -2.21
ABCA4P78363 AC087481.2-201ENST00000565492 330 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 AC022662.1-201ENST00000580252 331 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
ABCA4P78363 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
ABCA4P78363 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
ABCA4P78363 CR848007.1-201ENST00000442354 1699 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 RNA5SP27-201ENST00000363839 119 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 RNU6-730P-201ENST00000383954 104 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 DSTNP4-201ENST00000399472 474 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 RNU2-40P-201ENST00000410833 196 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 POLHP1-201ENST00000411806 470 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.27□□□□□ -2.21
ABCA4P78363 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 AC015908.1-201ENST00000478739 476 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.27□□□□□ -2.21
ABCA4P78363 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.27□□□□□ -2.21
ABCA4P78363 OR4K8P-201ENST00000578842 1048 ntBASIC1.27□□□□□ -2.21
ABCA4P78363 AC111188.2-201ENST00000529697 1387 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 U8.1-201ENST00000362843 134 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
ABCA4P78363 RNA5SP56-201ENST00000410277 118 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 AC092745.2-202ENST00000411880 369 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 HMGN1P14-201ENST00000412459 517 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 OR10R1P-201ENST00000441524 1141 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.26□□□□□ -2.21
ABCA4P78363 EEF1B2P4-201ENST00000551398 348 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 AC112503.2-201ENST00000609005 552 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 AC025588.4-201ENST00000615802 908 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.26□□□□□ -2.21
ABCA4P78363 STMN1P1-201ENST00000617809 440 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
ABCA4P78363 MTND5P31-201ENST00000419366 1374 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 MTND4P8-201ENST00000514997 1362 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.26□□□□□ -2.21
ABCA4P78363 RNU6-461P-201ENST00000364195 107 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.26□□□□□ -2.21
ABCA4P78363 RNU1-52P-201ENST00000384190 164 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 SNORD51-201ENST00000384320 80 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 AL023807.1-201ENST00000407932 359 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
ABCA4P78363 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.26□□□□□ -2.21
ABCA4P78363 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.26□□□□□ -2.21
ABCA4P78363 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.26□□□□□ -2.21
ABCA4P78363 OR52A4P-202ENST00000481634 799 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 MTCYBP18-201ENST00000501056 747 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 NDUFB4P2-201ENST00000509515 391 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 AC025755.1-201ENST00000521306 278 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.26□□□□□ -2.21
ABCA4P78363 HMGB1P14-201ENST00000557424 591 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.26□□□□□ -2.21
ABCA4P78363 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.26□□□□□ -2.21
ABCA4P78363 AC007229.1-201ENST00000590455 412 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 AC079597.1-201ENST00000624306 508 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.26□□□□□ -2.21
ABCA4P78363 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.26□□□□□ -2.21
ABCA4P78363 AL356118.1-201ENST00000635272 1078 ntBASIC1.26□□□□□ -2.21
ABCA4P78363 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
ABCA4P78363 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
ABCA4P78363 SNORA38-201ENST00000363946 132 ntBASIC1.25□□□□□ -2.21
ABCA4P78363 RNU6-1226P-201ENST00000384317 107 ntBASIC1.25□□□□□ -2.21
ABCA4P78363 RNU4-78P-201ENST00000410940 126 ntBASIC1.25□□□□□ -2.21
ABCA4P78363 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.25□□□□□ -2.21
ABCA4P78363 XKRYP1-201ENST00000423438 492 ntBASIC1.25□□□□□ -2.21
ABCA4P78363 XKRYP2-201ENST00000432915 492 ntBASIC1.25□□□□□ -2.21
ABCA4P78363 AL353689.1-201ENST00000438895 199 ntBASIC1.25□□□□□ -2.21
ABCA4P78363 PMCHL2-203ENST00000457791 237 ntBASIC1.25□□□□□ -2.21
ABCA4P78363 RPS3AP22-201ENST00000488297 769 ntBASIC1.25□□□□□ -2.21
ABCA4P78363 AC034222.1-201ENST00000494052 532 ntBASIC1.25□□□□□ -2.21
ABCA4P78363 AC008427.1-201ENST00000503102 655 ntBASIC1.25□□□□□ -2.21
ABCA4P78363 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.25□□□□□ -2.21
ABCA4P78363 RNA5SP364-201ENST00000516938 78 ntBASIC1.25□□□□□ -2.21
ABCA4P78363 C1DP5-201ENST00000525775 383 ntBASIC1.25□□□□□ -2.21
ABCA4P78363 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.25□□□□□ -2.21
ABCA4P78363 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.25□□□□□ -2.21
ABCA4P78363 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms